RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 PCDHA4Q9UN74 947 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 PCDHA1Q9Y5I3 950 aa24.94■■□□□ 1.58
ITGA4-204ENST00000465522 MYH15Q9Y2K3 1946 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 DDX11L8A8MPP1 907 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 IRF6O14896 467 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 FLOT1O75955 427 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 ITGBL1O95965 494 aaPredicted RBP24.93■■□□□ 1.58
ITGA4-204ENST00000465522 MYSM1Q5VVJ2 828 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 ATL3Q6DD88 541 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 FBXO11Q86XK2 927 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 AMNQ9BXJ7 453 aa24.93■■□□□ 1.58
ITGA4-204ENST00000465522 CXCL11O14625 94 aa24.92■■□□□ 1.58
ITGA4-204ENST00000465522 OPTNQ96CV9 577 aa24.92■■□□□ 1.58
ITGA4-204ENST00000465522 GDPD2Q9HCC8 539 aa24.92■■□□□ 1.58
ITGA4-204ENST00000465522 PPIL2Q13356 520 aa24.92■■□□□ 1.58
ITGA4-204ENST00000465522 PPP1R18Q6NYC8 613 aa24.92■■□□□ 1.58
ITGA4-204ENST00000465522 RANBP17Q9H2T7 1088 aaKnown RBP24.92■■□□□ 1.58
ITGA4-204ENST00000465522 ESYT2A0FGR8 921 aa24.91■■□□□ 1.58
ITGA4-204ENST00000465522 FIBPO43427 364 aa24.91■■□□□ 1.58
ITGA4-204ENST00000465522 TRAF1Q13077 416 aa24.91■■□□□ 1.58
ITGA4-204ENST00000465522 DAGLBQ8NCG7 672 aa24.91■■□□□ 1.58
ITGA4-204ENST00000465522 PTPRFP10586 1907 aa24.91■■□□□ 1.58
ITGA4-204ENST00000465522 PRPF40AO75400 957 aaKnown RBP24.9■■□□□ 1.58
ITGA4-204ENST00000465522 BICD2Q8TD16 824 aa24.9■■□□□ 1.58
ITGA4-204ENST00000465522 SCAND2PQ9GZW5 306 aaPredicted RBP24.9■■□□□ 1.58
ITGA4-204ENST00000465522 CEBPZQ03701 1054 aaKnown RBP24.89■■□□□ 1.58
ITGA4-204ENST00000465522 CSPP1Q1MSJ5 1256 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 USH1GQ495M9 461 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 CCDC174Q6PII3 467 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 USP28Q96RU2 1077 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 PPP1R9AQ9ULJ8 1098 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 KCNH4Q9UQ05 1017 aa24.89■■□□□ 1.58
ITGA4-204ENST00000465522 A0A0G2JLL6 359 aaPredicted RBP24.89■■□□□ 1.57
ITGA4-204ENST00000465522 ADAMTS3O15072 1205 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 PTMSP20962 102 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 ADCY7P51828 1080 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 NBR1Q14596 966 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 CST9Q5W186 159 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 CATSPERGQ6ZRH7 1159 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 PRRT2Q7Z6L0 340 aaPredicted RBP24.89■■□□□ 1.57
ITGA4-204ENST00000465522 TNFRSF25Q93038 417 aa24.89■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L15C9J2P7 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L13C9JLJ4 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L11C9JVI0 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L18D6R9N7 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L22D6RA61 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L17D6RBQ6 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L19D6RCP7 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L20D6RJB6 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 USP17L24Q0WX57 530 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 COG2Q14746 738 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 RILPL1Q5EBL4 403 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 GADL1Q6ZQY3 521 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 SPATA32Q96LK8 384 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 PSTPIP2Q9H939 334 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 PCDHA6Q9UN73 950 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 PCDHA8Q9Y5H6 950 aa24.88■■□□□ 1.57
ITGA4-204ENST00000465522 SMCHD1A6NHR9 2005 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 TRPM7Q96QT4 1865 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 M0R2N6 131 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 MRPL12P52815 198 aaKnown RBP24.87■■□□□ 1.57
ITGA4-204ENST00000465522 PROCA1Q8NCQ7 364 aaPredicted RBP24.87■■□□□ 1.57
ITGA4-204ENST00000465522 RASGRP4Q8TDF6 673 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 CUL5Q93034 780 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 RIC8AQ9NPQ8 531 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 LMBRD1Q9NUN5 540 aa24.87■■□□□ 1.57
ITGA4-204ENST00000465522 CTDP1Q9Y5B0 961 aaPredicted RBP24.87■■□□□ 1.57
ITGA4-204ENST00000465522 FDX1P10109 184 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 EARS2Q5JPH6 523 aaKnown RBP24.86■■□□□ 1.57
ITGA4-204ENST00000465522 PIK3AP1Q6ZUJ8 805 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 FTOQ9C0B1 505 aaKnown RBP eCLIP24.86■■□□□ 1.57
ITGA4-204ENST00000465522 GLT8D2Q9H1C3 349 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 CCDC194A0A1B0GVG4 234 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 ZBED4O75132 1171 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 DSG3P32926 999 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 REXO1Q8N1G1 1221 aaKnown RBP24.86■■□□□ 1.57
ITGA4-204ENST00000465522 SLC38A10Q9HBR0 1119 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 HOXC10Q9NYD6 342 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 RTEL1Q9NZ71 1219 aa24.86■■□□□ 1.57
ITGA4-204ENST00000465522 BIN2Q9UBW5 565 aaPredicted RBP24.86■■□□□ 1.57
ITGA4-204ENST00000465522 FAM205CA6NFA0 338 aa24.85■■□□□ 1.57
ITGA4-204ENST00000465522 NOM1Q5C9Z4 860 aaKnown RBP24.85■■□□□ 1.57
ITGA4-204ENST00000465522 TREML2Q5T2D2 321 aa24.85■■□□□ 1.57
ITGA4-204ENST00000465522 TMEM87AQ8NBN3 555 aa24.85■■□□□ 1.57
ITGA4-204ENST00000465522 LEO1Q8WVC0 666 aaPredicted RBP24.85■■□□□ 1.57
ITGA4-204ENST00000465522 POLR3EQ9NVU0 708 aa24.85■■□□□ 1.57
ITGA4-204ENST00000465522 NOL7Q9UMY1 257 aaKnown RBP24.85■■□□□ 1.57
ITGA4-204ENST00000465522 CLIC4Q9Y696 253 aa24.85■■□□□ 1.57
ITGA4-204ENST00000465522 PARP14Q460N5 1801 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 VWA5AO00534 786 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 KIF3CO14782 793 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 ICAM1P05362 532 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 GJA5P36382 358 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 TOB1P50616 345 aaPredicted RBP24.84■■□□□ 1.57
ITGA4-204ENST00000465522 SNAPC2Q13487 334 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 ANO1Q5XXA6 986 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 FASTKD5Q7L8L6 764 aaKnown RBP24.84■■□□□ 1.57
ITGA4-204ENST00000465522 ATG4CQ96DT6 458 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 RCOR1Q9UKL0 485 aa24.84■■□□□ 1.57
ITGA4-204ENST00000465522 ATP2B1P20020 1258 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms