RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 STAG2Q8N3U4 1231 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 SOCS4Q8WXH5 440 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 BRF1Q92994 677 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 UPF3BQ9BZI7 483 aaKnown RBP19.72■□□□□ 0.75
USP39-211ENST00000465282 PDRG1Q9NUG6 133 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 RBM28Q9NW13 759 aaKnown RBP19.72■□□□□ 0.75
USP39-211ENST00000465282 FBXO40Q9UH90 709 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 ZNF236Q9UL36 1845 aa19.72■□□□□ 0.75
USP39-211ENST00000465282 KLF18A0A0U1RQI7 1052 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 CCDC196A0A1B0GTZ2 297 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 CAPN15O75808 1086 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 ERCC3P19447 782 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 CAP1Q01518 475 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 TRAF1Q13077 416 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 ANKRD1Q15327 319 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 FBXO46Q6PJ61 603 aaPredicted RBP19.71■□□□□ 0.75
USP39-211ENST00000465282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.71■□□□□ 0.75
USP39-211ENST00000465282 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 CHST13Q8NET6 341 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 RIOX1Q9H6W3 641 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 RAVER2Q9HCJ3 691 aaKnown RBP19.71■□□□□ 0.75
USP39-211ENST00000465282 BRPF3Q9ULD4 1205 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 ZNF536O15090 1300 aa19.71■□□□□ 0.75
USP39-211ENST00000465282 SLC15A5A6NIM6 579 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 PTPREP23469 700 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 IRF5Q13568 498 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 MICU3Q86XE3 530 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 MTMR8Q96EF0 704 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 NUDT12Q9BQG2 462 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 MYL10Q9BUA6 226 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 SPZ1Q9BXG8 430 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 JMJD4Q9H9V9 463 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 PTPN22Q9Y2R2 807 aa19.7■□□□□ 0.74
USP39-211ENST00000465282 BAZ2BQ9UIF8 2168 aaKnown RBP19.7■□□□□ 0.74
USP39-211ENST00000465282 DHX16O60231 1041 aaKnown RBP19.69■□□□□ 0.74
USP39-211ENST00000465282 FCER1AP12319 257 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 APOBRQ0VD83 1088 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 WDR78Q5VTH9 848 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 ZNF274Q96GC6 653 aaPredicted RBP19.69■□□□□ 0.74
USP39-211ENST00000465282 MAF1Q9H063 256 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 GJD2Q9UKL4 321 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 CCPG1Q9ULG6 757 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 SMCHD1A6NHR9 2005 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 NID2Q14112 1375 aa19.69■□□□□ 0.74
USP39-211ENST00000465282 XRCC5P13010 732 aaKnown RBP19.68■□□□□ 0.74
USP39-211ENST00000465282 TOB2Q14106 344 aaPredicted RBP19.68■□□□□ 0.74
USP39-211ENST00000465282 GRB14Q14449 540 aa19.68■□□□□ 0.74
USP39-211ENST00000465282 CDC37Q16543 378 aaPredicted RBP19.68■□□□□ 0.74
USP39-211ENST00000465282 RTN1Q16799 776 aa19.68■□□□□ 0.74
USP39-211ENST00000465282 MORN1Q5T089 497 aa19.68■□□□□ 0.74
USP39-211ENST00000465282 COL13A1Q5TAT6 717 aaPredicted RBP19.68■□□□□ 0.74
USP39-211ENST00000465282 CCDC174Q6PII3 467 aa19.68■□□□□ 0.74
USP39-211ENST00000465282 SLC5A4Q9NY91 659 aa19.68■□□□□ 0.74
USP39-211ENST00000465282 GOLGA8AA7E2F4 631 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 ZBTB5O15062 677 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 RGS2P41220 211 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 FLT3LGP49771 235 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 METAP2P50579 478 aaKnown RBP eCLIP19.67■□□□□ 0.74
USP39-211ENST00000465282 NEK4P51957 841 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 PRKCZQ05513 592 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 KCTD2Q14681 263 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 TRMT44Q8IYL2 757 aaKnown RBP19.67■□□□□ 0.74
USP39-211ENST00000465282 TNS4Q8IZW8 715 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 RAET1EQ8TD07 263 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 USP6NLQ92738 828 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 AGBL1Q96MI9 1066 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 CPVLQ9H3G5 476 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 ACAD9Q9H845 621 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 VAT1LQ9HCJ6 419 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 RIPK3Q9Y572 518 aa19.67■□□□□ 0.74
USP39-211ENST00000465282 CYTH3O43739 400 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 ECM2O94769 699 aaPredicted RBP19.66■□□□□ 0.74
USP39-211ENST00000465282 HOXC6P09630 235 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 RXRAP19793 462 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 SNAP25P60880 206 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 MAP2K5Q13163 448 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 TMTC3Q6ZXV5 915 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 FBXO11Q86XK2 927 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 PXYLP1Q8TE99 480 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 TBC1D32Q96NH3 1257 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 TRERF1Q96PN7 1200 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 MMP19Q99542 508 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 AMNQ9BXJ7 453 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 MCOLN1Q9GZU1 580 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 NAP1L2Q9ULW6 460 aaPredicted RBP19.66■□□□□ 0.74
USP39-211ENST00000465282 GABRQQ9UN88 632 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 PLXNA1Q9UIW2 1896 aa19.66■□□□□ 0.74
USP39-211ENST00000465282 PNMA6FA0A0J9YX94 578 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 ALAS1P13196 640 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 PDIA3P30101 505 aaKnown RBP19.65■□□□□ 0.74
USP39-211ENST00000465282 QRICH1Q2TAL8 776 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 SRBD1Q8N5C6 995 aaKnown RBP19.65■□□□□ 0.74
USP39-211ENST00000465282 SLAIN1Q8ND83 568 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 RRP36Q96EU6 259 aaKnown RBP19.65■□□□□ 0.74
USP39-211ENST00000465282 KIF2CQ99661 725 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 RNF146Q9NTX7 359 aa19.65■□□□□ 0.74
USP39-211ENST00000465282 HPS5Q9UPZ3 1129 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms