RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
XRN1-203ENST00000463916 CNNM2Q9H8M5 875 aa15.24■□□□□ 0.03
XRN1-203ENST00000463916 TNKSO95271 1327 aa15.24■□□□□ 0.03
XRN1-203ENST00000463916 PLXNA1Q9UIW2 1896 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 NT5C2P49902 561 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 TINF2Q9BSI4 451 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 LSG1Q9H089 658 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 DIS3Q9Y2L1 958 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 CEP290O15078 2479 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 E7EWF7 191 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 SEC23AQ15436 765 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 ANO1Q5XXA6 986 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
XRN1-203ENST00000463916 CHST13Q8NET6 341 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 DDX11Q96FC9 970 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 FGD4Q96M96 766 aa15.23■□□□□ 0.03
XRN1-203ENST00000463916 DDX20Q9UHI6 824 aaKnown RBP15.23■□□□□ 0.03
XRN1-203ENST00000463916 ALAS1P13196 640 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 COL9A3Q14050 684 aaPredicted RBP15.22■□□□□ 0.03
XRN1-203ENST00000463916 MUM1L1Q5H9M0 696 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 ANKRD35Q8N283 1001 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 ANKLE1Q8NAG6 615 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 TRERF1Q96PN7 1200 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 RNF146Q9NTX7 359 aa15.22■□□□□ 0.03
XRN1-203ENST00000463916 CAPN2P17655 700 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 CHST3Q7LGC8 479 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 UBAC1Q9BSL1 405 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 SENP2Q9HC62 589 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 FBXO40Q9UH90 709 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 ICAM1P05362 532 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 CNTN2Q02246 1040 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 NECAB2Q7Z6G3 386 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 DPF3Q92784 378 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 ACAD9Q9H845 621 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.03
XRN1-203ENST00000463916 CCPG1Q9ULG6 757 aa15.21■□□□□ 0.03
XRN1-203ENST00000463916 SNAI1O95863 264 aaPredicted RBP15.2■□□□□ 0.02
XRN1-203ENST00000463916 TRDNQ13061 729 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 KIAA1211Q6ZU35 1233 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 FRMPD3Q5JV73 1810 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 PFASO15067 1338 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 SEPT4O43236 478 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 IFIT1BQ5T764 474 aaKnown RBP15.2■□□□□ 0.02
XRN1-203ENST00000463916 MAMDC4Q6UXC1 1216 aa15.2■□□□□ 0.02
XRN1-203ENST00000463916 PURBQ96QR8 312 aaKnown RBP15.2■□□□□ 0.02
XRN1-203ENST00000463916 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
XRN1-203ENST00000463916 ASTN1O14525 1302 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 H0YGN5 161 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 NEFLP07196 543 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 ZNF865P0CJ78 1059 aaPredicted RBP15.19■□□□□ 0.02
XRN1-203ENST00000463916 COL6A1P12109 1028 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 ANTXR2P58335 489 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 NECTIN1Q15223 517 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 GPATCH4Q5T3I0 446 aaKnown RBP15.19■□□□□ 0.02
XRN1-203ENST00000463916 FAM133AQ8N9E0 248 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 NCOA7Q8NI08 942 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
XRN1-203ENST00000463916 SOWAHBA6NEL2 793 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 TKFCQ3LXA3 575 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 MB21D2Q8IYB1 491 aaPredicted RBP15.18■□□□□ 0.02
XRN1-203ENST00000463916 STAG2Q8N3U4 1231 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 HTATIP2Q9BUP3 242 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 C11orf49Q9H6J7 331 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 NFIBO00712 420 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 SLC27A2O14975 620 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 MSCO60682 206 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 ZNF467Q7Z7K2 595 aaPredicted RBP15.18■□□□□ 0.02
XRN1-203ENST00000463916 RALYLQ86SE5 291 aaKnown RBP15.18■□□□□ 0.02
XRN1-203ENST00000463916 LENG1Q96BZ8 264 aaPredicted RBP15.18■□□□□ 0.02
XRN1-203ENST00000463916 GPHNQ9NQX3 736 aaPredicted RBP15.18■□□□□ 0.02
XRN1-203ENST00000463916 CYP39A1Q9NYL5 469 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 ALPK3Q96L96 1907 aa15.18■□□□□ 0.02
XRN1-203ENST00000463916 SYNGAP1Q96PV0 1343 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 POTEB2H3BUK9 544 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 IFIT3O14879 490 aaKnown RBP15.17■□□□□ 0.02
XRN1-203ENST00000463916 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 CCDC144CPQ8IYA2 1237 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 ADGRF4Q8IZF3 695 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 MSL3Q8N5Y2 521 aaKnown RBP15.17■□□□□ 0.02
XRN1-203ENST00000463916 IGDCC4Q8TDY8 1250 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 CLEC4DQ8WXI8 215 aa15.17■□□□□ 0.02
XRN1-203ENST00000463916 MCM3APO60318 1980 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
XRN1-203ENST00000463916 ASPRV1Q53RT3 343 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 GJC2Q5T442 439 aaPredicted RBP15.16■□□□□ 0.02
XRN1-203ENST00000463916 NSMFQ6X4W1 530 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.16■□□□□ 0.02
XRN1-203ENST00000463916 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 CDC45O75419 566 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 BAATQ14032 418 aaPredicted RBP15.16■□□□□ 0.02
XRN1-203ENST00000463916 SLC35G1Q2M3R5 365 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 ARMCX2Q7L311 632 aa15.16■□□□□ 0.02
XRN1-203ENST00000463916 JMJD4Q9H9V9 463 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms