RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FAM126BQ8IXS8 530 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
SND1-203ENST00000463020 MSL3Q8N5Y2 521 aaKnown RBP18.79■□□□□ 0.6
SND1-203ENST00000463020 CHMP4CQ96CF2 233 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 SLC38A10Q9HBR0 1119 aa18.79■□□□□ 0.6
SND1-203ENST00000463020 BDP1A6H8Y1 2624 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 MINDY4BA8MYZ0 360 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 ATP2A1O14983 1001 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 CYP2C18P33260 490 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 GJA9P57773 515 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 SBK1Q52WX2 424 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 TJAP1Q5JTD0 557 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 ZNF365Q70YC5 407 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.6
SND1-203ENST00000463020 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
SND1-203ENST00000463020 CCDC144CPQ8IYA2 1237 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 PRPF38AQ8NAV1 312 aaKnown RBP18.78■□□□□ 0.6
SND1-203ENST00000463020 HOMER2Q9NSB8 354 aa18.78■□□□□ 0.6
SND1-203ENST00000463020 LRRC37A2A6NM11 1700 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 ELP1O95163 1332 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 M0R2C6 588 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 ARVCFO00192 962 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 HMMRO75330 724 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 C20orf194Q5TEA3 1177 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 VWCEQ96DN2 955 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 CEP95Q96GE4 821 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 GLT1D1Q96MS3 346 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 YBX2Q9Y2T7 364 aaKnown RBP18.77■□□□□ 0.6
SND1-203ENST00000463020 TRANK1O15050 2925 aa18.77■□□□□ 0.6
SND1-203ENST00000463020 GRIN2DO15399 1336 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 MYH4Q9Y623 1939 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
SND1-203ENST00000463020 CD4P01730 458 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 GNASQ5JWF2 1037 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 ANKRD35Q8N283 1001 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 DDRGK1Q96HY6 314 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 MKNK2Q9HBH9 465 aa18.76■□□□□ 0.59
SND1-203ENST00000463020 ZNF536O15090 1300 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 SOWAHBA6NEL2 793 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 RBAK-RBAKDNI3L0D1 243 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 ZBED4O75132 1171 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 SNAP25P60880 206 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 PPIGQ13427 754 aaKnown RBP eCLIP18.75■□□□□ 0.596e-11■□□□□ 10.3
SND1-203ENST00000463020 CCDC85BQ15834 202 aaPredicted RBP18.75■□□□□ 0.59
SND1-203ENST00000463020 CCDC129Q6ZRS4 1044 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 VTI1AQ96AJ9 217 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 ABHD16BQ9H3Z7 469 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 MTMR4Q9NYA4 1195 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 DDX19BQ9UMR2 479 aa18.75■□□□□ 0.59
SND1-203ENST00000463020 GBF1Q92538 1859 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 FAM133AQ8N9E0 248 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 SYMPKQ92797 1274 aaKnown RBP18.74■□□□□ 0.59
SND1-203ENST00000463020 MKL1Q969V6 931 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 AGBL1Q96MI9 1066 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 PURBQ96QR8 312 aaKnown RBP18.74■□□□□ 0.59
SND1-203ENST00000463020 NKX2-4Q9H2Z4 354 aa18.74■□□□□ 0.59
SND1-203ENST00000463020 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 GPAA1O43292 621 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 NKX3-2P78367 333 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 SLC43A3Q8NBI5 491 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 PCSK9Q8NBP7 692 aaKnown RBP18.73■□□□□ 0.59
SND1-203ENST00000463020 SEC62Q99442 399 aaKnown RBP18.73■□□□□ 0.59
SND1-203ENST00000463020 LRRCC1Q9C099 1032 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 WNT8AQ9H1J5 351 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 A1CFQ9NQ94 594 aaKnown RBP18.73■□□□□ 0.59
SND1-203ENST00000463020 PDGFCQ9NRA1 345 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 FEM1BQ9UK73 627 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 GNEQ9Y223 722 aaKnown RBP18.73■□□□□ 0.59
SND1-203ENST00000463020 MROH7Q68CQ1 1323 aa18.73■□□□□ 0.59
SND1-203ENST00000463020 LCTP09848 1927 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 MYOGP15173 224 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 RABGGTBP53611 331 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 CCL23P55773 120 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 PSMC6P62333 389 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 TMEM199Q8N511 208 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 GMCL1P1Q8NEA9 526 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 CHST13Q8NET6 341 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 HERVK_113Q902F9 699 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 APPBP2Q92624 585 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 TRPV6Q9H1D0 765 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 IL23AQ9NPF7 189 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
SND1-203ENST00000463020 TMEM232C9JQI7 657 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
SND1-203ENST00000463020 SMPD1P17405 629 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 COL9A1P20849 921 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 GIMAP6Q6P9H5 292 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 PSRC1Q6PGN9 363 aaPredicted RBP18.71■□□□□ 0.59
SND1-203ENST00000463020 OTOP2Q7RTS6 562 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 INCENPQ9NQS7 918 aa18.71■□□□□ 0.59
SND1-203ENST00000463020 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
SND1-203ENST00000463020 B4GALT4O60513 344 aa18.7■□□□□ 0.58
SND1-203ENST00000463020 TTLL1O95922 423 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms