RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZNF214Q9UL59 606 aaPredicted RBP9.4□□□□□ -0.9
SMC3-202ENST00000462899 C5orf42Q9H799 3197 aa9.4□□□□□ -0.91
SMC3-202ENST00000462899 MROH7Q68CQ1 1323 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 CTAGE5O15320 804 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 SNAI1O95863 264 aaPredicted RBP9.39□□□□□ -0.91
SMC3-202ENST00000462899 CD4P01730 458 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 POU3F3P20264 500 aaPredicted RBP9.39□□□□□ -0.91
SMC3-202ENST00000462899 USP5P45974 858 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 NKX3-2P78367 333 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 TFF2Q03403 129 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 RAB30Q15771 203 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
SMC3-202ENST00000462899 KCNA10Q16322 511 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 CCDC158Q5M9N0 1113 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 MAMDC4Q6UXC1 1216 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMC3-202ENST00000462899 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 MSL3Q8N5Y2 521 aaKnown RBP9.39□□□□□ -0.91
SMC3-202ENST00000462899 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 NUP133Q8WUM0 1156 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 LRFN3Q9BTN0 628 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
SMC3-202ENST00000462899 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 ZNF318Q5VUA4 2279 aa9.39□□□□□ -0.91
SMC3-202ENST00000462899 DNAJC25-GNG10A0A024R161 153 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 ERC2O15083 957 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
SMC3-202ENST00000462899 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
SMC3-202ENST00000462899 FLOT1O75955 427 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 ACRP10323 421 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 KCNQ1P51787 676 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 G3BP1Q13283 466 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC3-202ENST00000462899 PLS1Q14651 629 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 TMEM179Q6ZVK1 233 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 SLC43A3Q8NBI5 491 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 SSH3Q8TE77 659 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 FGD4Q96M96 766 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 MMP19Q99542 508 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 NKX2-4Q9H2Z4 354 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 EPHX3Q9H6B9 360 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 ANTXR1Q9H6X2 564 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 IL23AQ9NPF7 189 aa9.38□□□□□ -0.91
SMC3-202ENST00000462899 SCN10AQ9Y5Y9 1956 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 MYO15AQ9UKN7 3530 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 DMDP11532 3685 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 CFAP54Q96N23 3096 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 ARVCFO00192 962 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 VWA5AO00534 786 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 IDH1O75874 414 aaKnown RBP9.37□□□□□ -0.91
SMC3-202ENST00000462899 GNAI2P04899 355 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
SMC3-202ENST00000462899 GJA9P57773 515 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 CCDC174Q6PII3 467 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 CCDC129Q6ZRS4 1044 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 TMEM199Q8N511 208 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 ZNF454Q8N9F8 522 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 DDX12PQ92771 950 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 KATNBL1Q9H079 304 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 FBXO28Q9NVF7 368 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 PPP1R9AQ9ULJ8 1098 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
SMC3-202ENST00000462899 UMODL1Q5DID0 1318 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 SIP14410 1827 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
SMC3-202ENST00000462899 ANP32CO43423 234 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 ASGR1P07306 291 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 TRIM27P14373 513 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 AKR1B1P15121 316 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 IGFBP4P22692 258 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 ICA1Q05084 483 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 EAF2Q96CJ1 260 aaPredicted RBP9.36□□□□□ -0.91
SMC3-202ENST00000462899 GLT1D1Q96MS3 346 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 DCP1AQ9NPI6 582 aaPredicted RBP9.36□□□□□ -0.91
SMC3-202ENST00000462899 MSRAQ9UJ68 235 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 FAM184BQ9ULE4 1060 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 CNPY2Q9Y2B0 182 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 NOP58Q9Y2X3 529 aaKnown RBP9.36□□□□□ -0.91
SMC3-202ENST00000462899 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
SMC3-202ENST00000462899 ASTN1O14525 1302 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 TCRBV5S4A2TA0A5A2 114 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 SMIM22K7EJ46 135 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 TLL1O43897 1013 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 GPR37L1O60883 481 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 CYP2D6P10635 497 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 CYP2C18P33260 490 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 COPB2P35606 906 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 STAT3P40763 770 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 KCTD2Q14681 263 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 PCSK9Q8NBP7 692 aaKnown RBP9.35□□□□□ -0.91
SMC3-202ENST00000462899 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 SLC28A3Q9HAS3 691 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 SWAP70Q9UH65 585 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 RIPK3Q9Y572 518 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 PCDHA11Q9Y5I1 949 aa9.35□□□□□ -0.91
SMC3-202ENST00000462899 MTCH2Q9Y6C9 303 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms