RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 KCTD2Q14681 263 aa23.42■■□□□ 1.34
SNAPC3-204ENST00000461041 CHST13Q8NET6 341 aa23.42■■□□□ 1.34
SNAPC3-204ENST00000461041 USP26Q9BXU7 913 aa23.42■■□□□ 1.34
SNAPC3-204ENST00000461041 SNX14Q9Y5W7 946 aa23.42■■□□□ 1.34
SNAPC3-204ENST00000461041 ICAM1P05362 532 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 CCL5P13501 91 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 TROAPQ12815 778 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 TRIM32Q13049 653 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 CATIPQ7Z7H3 387 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 STAG2Q8N3U4 1231 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 TMEM106CQ9BVX2 250 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 LRRC2Q9BYS8 371 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 HOMER2Q9NSB8 354 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 FBXO40Q9UH90 709 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 MAD2L2Q9UI95 211 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 CCPG1Q9ULG6 757 aa23.41■■□□□ 1.34
SNAPC3-204ENST00000461041 ALAS1P13196 640 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 EXOSC10Q01780 885 aaKnown RBP23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 GRM4Q14833 912 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 TKFCQ3LXA3 575 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 DHX32Q7L7V1 743 aaKnown RBP23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 TMTC2Q8N394 836 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 RNF146Q9NTX7 359 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 SLC5A4Q9NY91 659 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 FLRT1Q9NZU1 646 aa23.4■■□□□ 1.34
SNAPC3-204ENST00000461041 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.34
SNAPC3-204ENST00000461041 POTEFA5A3E0 1075 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 PALM3A6NDB9 673 aaPredicted RBP23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 PGK2P07205 417 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 LIFRP42702 1097 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 NFXL1Q6ZNB6 911 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 ADGRF4Q8IZF3 695 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 ZNF654Q8IZM8 581 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 TRERF1Q96PN7 1200 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 UNC93B1Q9H1C4 597 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 ACAD9Q9H845 621 aa23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 RBBP6Q7Z6E9 1792 aaKnown RBP23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 ZNFX1Q9P2E3 1918 aaKnown RBP23.39■■□□□ 1.33
SNAPC3-204ENST00000461041 CCDC69A6NI79 296 aa23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 KLRF2D3W0D1 207 aa23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 HMGB1P09429 215 aaKnown RBP23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 TAL1P17542 331 aaPredicted RBP23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 TCEANC2Q96MN5 208 aa23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 JAKMIP1Q96N16 626 aaKnown RBP23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 RNF208Q9H0X6 261 aa23.38■■□□□ 1.33
SNAPC3-204ENST00000461041 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 DDAH1O94760 285 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 ZNF792Q3KQV3 632 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 MAP3K21Q5TCX8 1036 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 OLFML2BQ68BL8 750 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 ANKRD35Q8N283 1001 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 NUP133Q8WUM0 1156 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 DDX11Q96FC9 970 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 MYL10Q9BUA6 226 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 JMJD4Q9H9V9 463 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 PNMA2Q9UL42 364 aa23.37■■□□□ 1.33
SNAPC3-204ENST00000461041 RPTORQ8N122 1335 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 IGHA2P01877 340 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 PRKAR2AP13861 404 aaKnown RBP23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 CACNB2Q08289 660 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 CDC37Q16543 378 aaPredicted RBP23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 MUM1L1Q5H9M0 696 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 MFSD14CQ5VZR4 134 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 SGMS1Q86VZ5 419 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 MAML3Q96JK9 1138 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 MAP3K14Q99558 947 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 VAT1LQ9HCJ6 419 aa23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 DIS3Q9Y2L1 958 aaKnown RBP23.36■■□□□ 1.33
SNAPC3-204ENST00000461041 CPA1P15085 419 aa23.35■■□□□ 1.33
SNAPC3-204ENST00000461041 CYP2C19P33261 490 aa23.35■■□□□ 1.33
SNAPC3-204ENST00000461041 BLOC1S2Q6QNY1 142 aa23.35■■□□□ 1.33
SNAPC3-204ENST00000461041 HMX1Q9NP08 348 aaPredicted RBP23.35■■□□□ 1.33
SNAPC3-204ENST00000461041 PLXNA1Q9UIW2 1896 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 GJB1P08034 283 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 PSMA5P28066 241 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 QRICH1Q2TAL8 776 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 CTCFLQ8NI51 663 aaPredicted RBP23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 A1CFQ9NQ94 594 aaKnown RBP23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 PAK6Q9NQU5 681 aaPredicted RBP23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 SLC12A7Q9Y666 1083 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 CENPFP49454 3210 aa23.34■■□□□ 1.33
SNAPC3-204ENST00000461041 EN2P19622 333 aaPredicted RBP23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 KIF5BP33176 963 aa23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 RGS19P49795 217 aa23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 SLC35G1Q2M3R5 365 aa23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 MTMR8Q96EF0 704 aa23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 RIOX1Q9H6W3 641 aa23.33■■□□□ 1.33
SNAPC3-204ENST00000461041 SMCHD1A6NHR9 2005 aa23.33■■□□□ 1.32
SNAPC3-204ENST00000461041 PFASO15067 1338 aa23.33■■□□□ 1.32
SNAPC3-204ENST00000461041 NFIBO00712 420 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 CALM1P0DP23 149 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 CALM2P0DP24 149 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 CALM3P0DP25 149 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 RXRAP19793 462 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 RPS6KB1P23443 525 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 USH1GQ495M9 461 aa23.32■■□□□ 1.32
SNAPC3-204ENST00000461041 NSMFQ6X4W1 530 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms