RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 ELNP15502 786 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 ADORA2AP29274 412 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 GRM4Q14833 912 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 TKFCQ3LXA3 575 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 BLOC1S2Q6QNY1 142 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 DPP9Q86TI2 863 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 CHST13Q8NET6 341 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 NUP133Q8WUM0 1156 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 USP6NLQ92738 828 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 ZNF333Q96JL9 665 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 LRRC2Q9BYS8 371 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 CCPG1Q9ULG6 757 aa21.46■■□□□ 1.03
DDR1-241ENST00000460944 CAPN15O75808 1086 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 ICAM1P05362 532 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 FGD1P98174 961 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 ZNF654Q8IZM8 581 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 CTCFLQ8NI51 663 aaPredicted RBP21.45■■□□□ 1.02
DDR1-241ENST00000460944 AGBL1Q96MI9 1066 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 GPHNQ9NQX3 736 aaPredicted RBP21.45■■□□□ 1.02
DDR1-241ENST00000460944 HOMER2Q9NSB8 354 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 RIPK3Q9Y572 518 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 ZNF536O15090 1300 aa21.45■■□□□ 1.02
DDR1-241ENST00000460944 KLRF2D3W0D1 207 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 HMGCRP04035 888 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 CALM1P0DP23 149 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 CALM2P0DP24 149 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 CALM3P0DP25 149 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 ALAS1P13196 640 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
DDR1-241ENST00000460944 TROAPQ12815 778 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 COL9A3Q14050 684 aaPredicted RBP21.44■■□□□ 1.02
DDR1-241ENST00000460944 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 TCEANC2Q96MN5 208 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 CPVLQ9H3G5 476 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 ACAD9Q9H845 621 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 RNF146Q9NTX7 359 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 MAD2L2Q9UI95 211 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 GTF3C3Q9Y5Q9 886 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 SLC12A7Q9Y666 1083 aa21.44■■□□□ 1.02
DDR1-241ENST00000460944 PLXNA1Q9UIW2 1896 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 SMCHD1A6NHR9 2005 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 BAZ2BQ9UIF8 2168 aaKnown RBP21.43■■□□□ 1.02
DDR1-241ENST00000460944 INHAP05111 366 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 HOXC6P09630 235 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 KIF5BP33176 963 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
DDR1-241ENST00000460944 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 STAG2Q8N3U4 1231 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 TRIB2Q92519 343 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 MAP3K14Q99558 947 aa21.43■■□□□ 1.02
DDR1-241ENST00000460944 PALM3A6NDB9 673 aaPredicted RBP21.42■■□□□ 1.02
DDR1-241ENST00000460944 MYCP01106 439 aaPredicted RBP21.42■■□□□ 1.02
DDR1-241ENST00000460944 CASTP20810 708 aaKnown RBP21.42■■□□□ 1.02
DDR1-241ENST00000460944 SGMS1Q86VZ5 419 aa21.42■■□□□ 1.02
DDR1-241ENST00000460944 ANKRD35Q8N283 1001 aa21.42■■□□□ 1.02
DDR1-241ENST00000460944 TRERF1Q96PN7 1200 aa21.42■■□□□ 1.02
DDR1-241ENST00000460944 TMEM106CQ9BVX2 250 aa21.42■■□□□ 1.02
DDR1-241ENST00000460944 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDR1-241ENST00000460944 MYL10Q9BUA6 226 aa21.41■■□□□ 1.02
DDR1-241ENST00000460944 VAT1LQ9HCJ6 419 aa21.41■■□□□ 1.02
DDR1-241ENST00000460944 COBLO75128 1261 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 CPA1P15085 419 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 GNAQP50148 359 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 CCL14Q16627 93 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 MFSD14CQ5VZR4 134 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 NPLOC4Q8TAT6 608 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 CENPFP49454 3210 aa21.4■■□□□ 1.02
DDR1-241ENST00000460944 PFASO15067 1338 aa21.39■■□□□ 1.01
DDR1-241ENST00000460944 PGK2P07205 417 aa21.39■■□□□ 1.01
DDR1-241ENST00000460944 Q6ZUG5 572 aa21.39■■□□□ 1.01
DDR1-241ENST00000460944 MICU3Q86XE3 530 aa21.39■■□□□ 1.01
DDR1-241ENST00000460944 JMJD4Q9H9V9 463 aa21.39■■□□□ 1.01
DDR1-241ENST00000460944 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
DDR1-241ENST00000460944 CCL5P13501 91 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 RXRAP19793 462 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 SOX10P56693 466 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 ANAPC15P60006 121 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 MTFR1Q15390 333 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 QRICH1Q2TAL8 776 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 USH1GQ495M9 461 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 OLFML2BQ68BL8 750 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 APOA5Q6Q788 366 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 LZTS2Q9BRK4 669 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 TM6SF1Q9BZW5 370 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 RNF208Q9H0X6 261 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 DIS3Q9Y2L1 958 aaKnown RBP21.38■■□□□ 1.01
DDR1-241ENST00000460944 CYP46A1Q9Y6A2 500 aa21.38■■□□□ 1.01
DDR1-241ENST00000460944 ABCB11O95342 1321 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 KLF18A0A0U1RQI7 1052 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 ZBTB43O43298 467 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 PRKAR2AP13861 404 aaKnown RBP21.37■■□□□ 1.01
DDR1-241ENST00000460944 TAL1P17542 331 aaPredicted RBP21.37■■□□□ 1.01
DDR1-241ENST00000460944 ZNF792Q3KQV3 632 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 MUM1L1Q5H9M0 696 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 NSMFQ6X4W1 530 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 RUFY3Q7L099 469 aa21.37■■□□□ 1.01
DDR1-241ENST00000460944 FBXO11Q86XK2 927 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms