RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ABRAQ8N0Z2 381 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 SLC5A4Q9NY91 659 aa25.41■■□□□ 1.66
SSNA1-202ENST00000459860 ZNFX1Q9P2E3 1918 aaKnown RBP25.4■■□□□ 1.66
SSNA1-202ENST00000459860 GOLGA8HP0CJ92 632 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 HSPA4P34932 840 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 CCDC174Q6PII3 467 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 CATIPQ7Z7H3 387 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 DPP9Q86TI2 863 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 DPF3Q92784 378 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 MMP19Q99542 508 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 FBXO40Q9UH90 709 aa25.4■■□□□ 1.66
SSNA1-202ENST00000459860 HMGCRP04035 888 aa25.39■■□□□ 1.66
SSNA1-202ENST00000459860 HMGB1P09429 215 aaKnown RBP25.39■■□□□ 1.66
SSNA1-202ENST00000459860 ADORA2AP29274 412 aa25.39■■□□□ 1.66
SSNA1-202ENST00000459860 NFXL1Q6ZNB6 911 aa25.39■■□□□ 1.66
SSNA1-202ENST00000459860 TMTC2Q8N394 836 aa25.39■■□□□ 1.66
SSNA1-202ENST00000459860 USP6NLQ92738 828 aa25.39■■□□□ 1.66
SSNA1-202ENST00000459860 RANBP17Q9H2T7 1088 aaKnown RBP25.39■■□□□ 1.66
SSNA1-202ENST00000459860 PLXNA1Q9UIW2 1896 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 MYH6P13533 1939 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 CHRDL2Q6WN34 429 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 RASEFQ8IZ41 740 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 IGDCC4Q8TDY8 1250 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 PAK6Q9NQU5 681 aaPredicted RBP25.38■■□□□ 1.65
SSNA1-202ENST00000459860 PNMA2Q9UL42 364 aa25.38■■□□□ 1.65
SSNA1-202ENST00000459860 WDR19Q8NEZ3 1342 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 CCDC69A6NI79 296 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 DHX16O60231 1041 aaKnown RBP25.37■■□□□ 1.65
SSNA1-202ENST00000459860 FARP2O94887 1054 aaPredicted RBP25.37■■□□□ 1.65
SSNA1-202ENST00000459860 TKFCQ3LXA3 575 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 CHST13Q8NET6 341 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 HTATIP2Q9BUP3 242 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 PRO3102Q9H379 93 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 LY9Q9HBG7 655 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 CCPG1Q9ULG6 757 aa25.37■■□□□ 1.65
SSNA1-202ENST00000459860 RANBP2P49792 3224 aaKnown RBP25.37■■□□□ 1.65
SSNA1-202ENST00000459860 SH2B2O14492 632 aaPredicted RBP25.36■■□□□ 1.65
SSNA1-202ENST00000459860 HOXC6P09630 235 aa25.36■■□□□ 1.65
SSNA1-202ENST00000459860 SNAP25P60880 206 aa25.36■■□□□ 1.65
SSNA1-202ENST00000459860 KCNB2Q92953 911 aa25.36■■□□□ 1.65
SSNA1-202ENST00000459860 HOMER2Q9NSB8 354 aa25.36■■□□□ 1.65
SSNA1-202ENST00000459860 RBM27Q9P2N5 1060 aaKnown RBP25.36■■□□□ 1.65
SSNA1-202ENST00000459860 RIPK3Q9Y572 518 aa25.36■■□□□ 1.65
SSNA1-202ENST00000459860 ICAM1P05362 532 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 ALAS1P13196 640 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 LIFRP42702 1097 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 ADCK5Q3MIX3 580 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 DHX32Q7L7V1 743 aaKnown RBP25.35■■□□□ 1.65
SSNA1-202ENST00000459860 TRIB2Q92519 343 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 DDX11Q96FC9 970 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 AGBL1Q96MI9 1066 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 DEFB118Q96PH6 123 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 UBA5Q9GZZ9 404 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 CRISPLD2Q9H0B8 497 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 ACAD9Q9H845 621 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 RNF146Q9NTX7 359 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 SNX14Q9Y5W7 946 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 ZNF536O15090 1300 aa25.35■■□□□ 1.65
SSNA1-202ENST00000459860 DDAH1O94760 285 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 GRM4Q14833 912 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 ZNF654Q8IZM8 581 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 ANKRD35Q8N283 1001 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 CTCFLQ8NI51 663 aaPredicted RBP25.34■■□□□ 1.65
SSNA1-202ENST00000459860 NUP133Q8WUM0 1156 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 JAKMIP1Q96N16 626 aaKnown RBP25.34■■□□□ 1.65
SSNA1-202ENST00000459860 SENP2Q9HC62 589 aa25.34■■□□□ 1.65
SSNA1-202ENST00000459860 KLRF2D3W0D1 207 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 PSMA5P28066 241 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 FGD1P98174 961 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 MFSD14CQ5VZR4 134 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 BLOC1S2Q6QNY1 142 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 TRERF1Q96PN7 1200 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 USP26Q9BXU7 913 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 LRRC2Q9BYS8 371 aa25.33■■□□□ 1.65
SSNA1-202ENST00000459860 SZT2Q5T011 3432 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CALM1P0DP23 149 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CALM2P0DP24 149 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CALM3P0DP25 149 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CAPN2P17655 700 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 KIF5BP33176 963 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 TROAPQ12815 778 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CCL14Q16627 93 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 SYNE3Q6ZMZ3 975 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 ADGRF4Q8IZF3 695 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 NPLOC4Q8TAT6 608 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 MAP3K14Q99558 947 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CPVLQ9H3G5 476 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 GPHNQ9NQX3 736 aaPredicted RBP25.32■■□□□ 1.64
SSNA1-202ENST00000459860 MAD2L2Q9UI95 211 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 SLC12A7Q9Y666 1083 aa25.32■■□□□ 1.64
SSNA1-202ENST00000459860 CEP290O15078 2479 aa25.31■■□□□ 1.64
SSNA1-202ENST00000459860 PALM3A6NDB9 673 aaPredicted RBP25.31■■□□□ 1.64
SSNA1-202ENST00000459860 TFRCP02786 760 aaKnown RBP25.31■■□□□ 1.64
SSNA1-202ENST00000459860 CDC37Q16543 378 aaPredicted RBP25.31■■□□□ 1.64
SSNA1-202ENST00000459860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.31■■□□□ 1.64
SSNA1-202ENST00000459860 STAG2Q8N3U4 1231 aa25.31■■□□□ 1.64
SSNA1-202ENST00000459860 COBLO75128 1261 aa25.3■■□□□ 1.64
SSNA1-202ENST00000459860 PGK2P07205 417 aa25.3■■□□□ 1.64
SSNA1-202ENST00000459860 OLFML2BQ68BL8 750 aa25.3■■□□□ 1.64
SSNA1-202ENST00000459860 VAT1LQ9HCJ6 419 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms