RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 RNF20Q5VTR2 975 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 BTNL9Q6UXG8 535 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 MAML3Q96JK9 1138 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 TRERF1Q96PN7 1200 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 ACAD9Q9H845 621 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 CCPG1Q9ULG6 757 aa21.16■□□□□ 0.98
PDLIM2-215ENST00000456545 DHX16O60231 1041 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-215ENST00000456545 GOLGA8HP0CJ92 632 aa21.15■□□□□ 0.98
PDLIM2-215ENST00000456545 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
PDLIM2-215ENST00000456545 RNF146Q9NTX7 359 aa21.15■□□□□ 0.98
PDLIM2-215ENST00000456545 DIS3Q9Y2L1 958 aaKnown RBP21.15■□□□□ 0.98
PDLIM2-215ENST00000456545 CENPFP49454 3210 aa21.14■□□□□ 0.98
PDLIM2-215ENST00000456545 FARP2O94887 1054 aaPredicted RBP21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 PARP1P09874 1014 aaKnown RBP21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 SNHG28P0DPA3 235 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 WTAPQ15007 396 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 ZNF792Q3KQV3 632 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 CHST3Q7LGC8 479 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 UBA5Q9GZZ9 404 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 PNMA2Q9UL42 364 aa21.14■□□□□ 0.97
PDLIM2-215ENST00000456545 ZNF236Q9UL36 1845 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 SLC27A2O14975 620 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 ICAM1P05362 532 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 ASPRV1Q53RT3 343 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 CREB3L3Q68CJ9 461 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 CRISPLD2Q9H0B8 497 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 RANBP17Q9H2T7 1088 aaKnown RBP21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 TAF6LQ9Y6J9 622 aa21.13■□□□□ 0.97
PDLIM2-215ENST00000456545 ZNF536O15090 1300 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 MSCO60682 206 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 NECTIN1Q15223 517 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 SEC23AQ15436 765 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 TMEM67Q5HYA8 995 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 STOX1Q6ZVD7 989 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 TINF2Q9BSI4 451 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 VAT1LQ9HCJ6 419 aa21.12■□□□□ 0.97
PDLIM2-215ENST00000456545 POTEB2H3BUK9 544 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 PRAMEF19Q5SWL8 479 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 ANKLE1Q8NAG6 615 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 DPF3Q92784 378 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 HTATIP2Q9BUP3 242 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 DDX20Q9UHI6 824 aaKnown RBP21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 CNPY2Q9Y2B0 182 aa21.11■□□□□ 0.97
PDLIM2-215ENST00000456545 MCM5P33992 734 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 NSMFQ6X4W1 530 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 NECAB2Q7Z6G3 386 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 CATIPQ7Z7H3 387 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 CPVLQ9H3G5 476 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 OGDHLQ9ULD0 1010 aa21.1■□□□□ 0.97
PDLIM2-215ENST00000456545 PLXNA1Q9UIW2 1896 aa21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 PFASO15067 1338 aa21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 PRC1O43663 620 aa21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 CYBAP13498 195 aa21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 NFXL1Q6ZNB6 911 aa21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 MB21D2Q8IYB1 491 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 MSL3Q8N5Y2 521 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 PAWRQ96IZ0 340 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 A1CFQ9NQ94 594 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-215ENST00000456545 DNAJC25-GNG10A0A024R161 153 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 KLRF2D3W0D1 207 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 SEPT4O43236 478 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 MUM1L1Q5H9M0 696 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 TMTC2Q8N394 836 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 TRPV1Q8NER1 839 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.97
PDLIM2-215ENST00000456545 CCDC69A6NI79 296 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 MYCNP04198 464 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 CDC37Q16543 378 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 USH1GQ495M9 461 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 ANO1Q5XXA6 986 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 LHX8Q68G74 356 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 ZNF467Q7Z7K2 595 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 IGDCC4Q8TDY8 1250 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 NUP133Q8WUM0 1156 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 TMEM87BQ96K49 555 aa21.07■□□□□ 0.96
PDLIM2-215ENST00000456545 PTPDC1A2A3K4 754 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 REC8O95072 547 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 IGHA2P01877 340 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 ANTXR2P58335 489 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 CNTN2Q02246 1040 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 STAG2Q8N3U4 1231 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 MTA3Q9BTC8 594 aa21.06■□□□□ 0.96
PDLIM2-215ENST00000456545 WDR19Q8NEZ3 1342 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 SYNGAP1Q96PV0 1343 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 ASB14A6NK59 587 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 TAL1P17542 331 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 KRT32Q14532 448 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 MAMDC4Q6UXC1 1216 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 ARRDC4Q8NCT1 418 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 C11orf49Q9H6J7 331 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 SENP2Q9HC62 589 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 CYP39A1Q9NYL5 469 aa21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-215ENST00000456545 RARBP10826 455 aa21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 BAATQ14032 418 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-215ENST00000456545 GRM4Q14833 912 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms