RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 SYDE2Q5VT97 1194 aa21.08■□□□□ 0.97
CTNS-204ENST00000452111 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.08■□□□□ 0.97
CTNS-204ENST00000452111 C7orf61Q8IZ16 206 aa21.08■□□□□ 0.97
CTNS-204ENST00000452111 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
CTNS-204ENST00000452111 ZNF543Q08ER8 600 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 CENPQQ7L2Z9 268 aaPredicted RBP21.07■□□□□ 0.96
CTNS-204ENST00000452111 SKAP1Q86WV1 359 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 DGKHQ86XP1 1220 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 TRERF1Q96PN7 1200 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 ZSCAN10Q96SZ4 725 aaPredicted RBP21.07■□□□□ 0.96
CTNS-204ENST00000452111 KRT23Q9C075 422 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 CNNM2Q9H8M5 875 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 ZSWIM5Q9P217 1185 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 NRBP1Q9UHY1 535 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 CCPG1Q9ULG6 757 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 COLQQ9Y215 455 aaPredicted RBP21.07■□□□□ 0.96
CTNS-204ENST00000452111 CNPY2Q9Y2B0 182 aa21.07■□□□□ 0.96
CTNS-204ENST00000452111 DNM1LO00429 736 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 SGSM2O43147 1006 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 TKFCQ3LXA3 575 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 CCDC178Q5BJE1 867 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 GJC2Q5T442 439 aaPredicted RBP21.06■□□□□ 0.96
CTNS-204ENST00000452111 BTNL9Q6UXG8 535 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 CHRDL2Q6WN34 429 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 RANBP17Q9H2T7 1088 aaKnown RBP21.06■□□□□ 0.96
CTNS-204ENST00000452111 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
CTNS-204ENST00000452111 A1CFQ9NQ94 594 aaKnown RBP21.06■□□□□ 0.96
CTNS-204ENST00000452111 TNKSO95271 1327 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 ICAM1P05362 532 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 ZNF865P0CJ78 1059 aaPredicted RBP21.05■□□□□ 0.96
CTNS-204ENST00000452111 GOLGA8HP0CJ92 632 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 SNHG28P0DPA3 235 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 MUM1L1Q5H9M0 696 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 MSL3Q8N5Y2 521 aaKnown RBP21.05■□□□□ 0.96
CTNS-204ENST00000452111 ENAHQ8N8S7 591 aaPredicted RBP21.05■□□□□ 0.96
CTNS-204ENST00000452111 PNMA1Q8ND90 353 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 FGD4Q96M96 766 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 UBAC1Q9BSL1 405 aa21.05■□□□□ 0.96
CTNS-204ENST00000452111 SENP6Q9GZR1 1112 aaPredicted RBP21.05■□□□□ 0.96
CTNS-204ENST00000452111 ZHX1Q9UKY1 873 aaPredicted RBP21.05■□□□□ 0.96
CTNS-204ENST00000452111 SYNGAP1Q96PV0 1343 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 POTEB2H3BUK9 544 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 SNAI1O95863 264 aaPredicted RBP21.04■□□□□ 0.96
CTNS-204ENST00000452111 RARBP10826 455 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 CNTN2Q02246 1040 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 HABP4Q5JVS0 413 aaKnown RBP21.04■□□□□ 0.96
CTNS-204ENST00000452111 MAMDC4Q6UXC1 1216 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 ZNF467Q7Z7K2 595 aaPredicted RBP21.04■□□□□ 0.96
CTNS-204ENST00000452111 ARRDC4Q8NCT1 418 aa21.04■□□□□ 0.96
CTNS-204ENST00000452111 LENG1Q96BZ8 264 aaPredicted RBP21.04■□□□□ 0.96
CTNS-204ENST00000452111 U3KPZ7 1027 aaPredicted RBP21.04■□□□□ 0.96
CTNS-204ENST00000452111 KBTBD13C9JR72 458 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 CYP21A2P08686 494 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 AKR1A1P14550 325 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 TRDNQ13061 729 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 LRRC26Q2I0M4 334 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 GPATCH4Q5T3I0 446 aaKnown RBP21.03■□□□□ 0.96
CTNS-204ENST00000452111 ANKS1AQ92625 1134 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 XPNPEP3Q9NQH7 507 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 ZMYND8Q9ULU4 1186 aaPredicted RBP21.03■□□□□ 0.96
CTNS-204ENST00000452111 FRMPD3Q5JV73 1810 aa21.03■□□□□ 0.96
CTNS-204ENST00000452111 ZNFX1Q9P2E3 1918 aaKnown RBP21.02■□□□□ 0.96
CTNS-204ENST00000452111 ATN1P54259 1190 aaPredicted RBP21.02■□□□□ 0.96
CTNS-204ENST00000452111 NSMFQ6X4W1 530 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 CYB5R4Q7L1T6 521 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 ARMCX2Q7L311 632 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 FAM133AQ8N9E0 248 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 UBA5Q9GZZ9 404 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 CPVLQ9H3G5 476 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.02■□□□□ 0.96
CTNS-204ENST00000452111 TAF6LQ9Y6J9 622 aa21.02■□□□□ 0.96
CTNS-204ENST00000452111 PLXNA1Q9UIW2 1896 aa21.01■□□□□ 0.95
CTNS-204ENST00000452111 SYN1P17600 705 aa21.01■□□□□ 0.95
CTNS-204ENST00000452111 LRRC41Q15345 812 aa21.01■□□□□ 0.95
CTNS-204ENST00000452111 IFIT1BQ5T764 474 aaKnown RBP21.01■□□□□ 0.95
CTNS-204ENST00000452111 CCDC144CPQ8IYA2 1237 aa21.01■□□□□ 0.95
CTNS-204ENST00000452111 CYP39A1Q9NYL5 469 aa21.01■□□□□ 0.95
CTNS-204ENST00000452111 SOWAHBA6NEL2 793 aa21■□□□□ 0.95
CTNS-204ENST00000452111 NFIBO00712 420 aa21■□□□□ 0.95
CTNS-204ENST00000452111 PGK1P00558 417 aa21■□□□□ 0.95
CTNS-204ENST00000452111 ACVR2BQ13705 512 aa21■□□□□ 0.95
CTNS-204ENST00000452111 RBM27Q9P2N5 1060 aaKnown RBP21■□□□□ 0.95
CTNS-204ENST00000452111 FAM184BQ9ULE4 1060 aa21■□□□□ 0.95
CTNS-204ENST00000452111 ALPK3Q96L96 1907 aa21■□□□□ 0.95
CTNS-204ENST00000452111 RANBP2P49792 3224 aaKnown RBP20.99■□□□□ 0.95
CTNS-204ENST00000452111 ASPRV1Q53RT3 343 aa20.99■□□□□ 0.95
CTNS-204ENST00000452111 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
CTNS-204ENST00000452111 RALYLQ86SE5 291 aaKnown RBP20.99■□□□□ 0.95
CTNS-204ENST00000452111 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
CTNS-204ENST00000452111 PURBQ96QR8 312 aaKnown RBP20.99■□□□□ 0.95
CTNS-204ENST00000452111 ABHD16BQ9H3Z7 469 aa20.99■□□□□ 0.95
CTNS-204ENST00000452111 PCDH10Q9P2E7 1040 aa20.99■□□□□ 0.95
CTNS-204ENST00000452111 RBM8AQ9Y5S9 174 aaKnown RBP20.99■□□□□ 0.95
CTNS-204ENST00000452111 E7EWF7 191 aa20.98■□□□□ 0.95
CTNS-204ENST00000452111 PARP1P09874 1014 aaKnown RBP20.98■□□□□ 0.95
CTNS-204ENST00000452111 ADCYAP1R1P41586 468 aa20.98■□□□□ 0.95
CTNS-204ENST00000452111 SEC23AQ15436 765 aa20.98■□□□□ 0.95
CTNS-204ENST00000452111 STOX1Q6ZVD7 989 aa20.98■□□□□ 0.95
CTNS-204ENST00000452111 RNF180Q86T96 592 aa20.98■□□□□ 0.95
CTNS-204ENST00000452111 FERMT2Q96AC1 680 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms