RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TCIRG1Q13488 830 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 HIBCHQ6NVY1 386 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 CABP7Q86V35 215 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 GGT7Q9UJ14 662 aa13.75□□□□□ -0.21
UBE3B-204ENST00000449510 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
UBE3B-204ENST00000449510 A0A1B0GTH6 734 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 A0A1B0GUA9 196 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 ANKS4BQ8N8V4 417 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 LY9Q9HBG7 655 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 CD248Q9HCU0 757 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
UBE3B-204ENST00000449510 NIP7Q9Y221 180 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBE3B-204ENST00000449510 GOLGA8KD6RF30 607 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 NR1D1P20393 614 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 GCKP35557 465 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 CORO7P57737 925 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
UBE3B-204ENST00000449510 RPS6KA1Q15418 735 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 MB21D1Q8N884 522 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 OR2W6PQ8NHA6 318 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 NCAPGQ9BPX3 1015 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 LACRTQ9GZZ8 138 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 CALML3P27482 149 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 ZNF76P36508 570 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 FAM133BQ5BKY9 247 aaKnown RBP13.74□□□□□ -0.21
UBE3B-204ENST00000449510 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 ANKRD42Q8N9B4 389 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 HDAC7Q8WUI4 952 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 PYM1Q9BRP8 204 aaKnown RBP13.74□□□□□ -0.21
UBE3B-204ENST00000449510 TSGA10Q9BZW7 698 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
UBE3B-204ENST00000449510 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ARID4AP29374 1257 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 GJC1P36383 396 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 KCNJ6P48051 423 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ARL8AQ96BM9 186 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 STRBPQ96SI9 672 aaKnown RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 BIN2Q9UBW5 565 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 NOVA2Q9UNW9 492 aaKnown RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ADGRB3O60242 1522 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 COL15A1P39059 1388 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 PLEKP08567 350 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 TFAP4Q01664 338 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 PTPAQ15257 358 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 CACNA2D3Q8IZS8 1091 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 RSRC1Q96IZ7 334 aaKnown RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 PPP1R12CQ9BZL4 782 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 VEZTQ9HBM0 779 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 SAMD15Q9P1V8 674 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 EXOC5O00471 708 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 PDE8BO95263 885 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ZSCAN29Q8IWY8 852 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 RPGRIP1Q96KN7 1286 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 CRNKL1Q9BZJ0 848 aaKnown RBP13.73□□□□□ -0.21
UBE3B-204ENST00000449510 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 CXorf56Q9H5V9 222 aa13.73□□□□□ -0.21
UBE3B-204ENST00000449510 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 TCP1P17987 556 aaKnown RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 LPIN2Q92539 896 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 KIFC2Q96AC6 838 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 ATP8A1Q9Y2Q0 1164 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 RTL9Q8NET4 1388 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 TMEM2Q9UHN6 1383 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 VPS41P49754 854 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 TCEAL9Q9UHQ7 104 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 SHROOM2Q13796 1616 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 KIF11P52732 1056 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 THOC1Q96FV9 657 aaKnown RBP13.72□□□□□ -0.21
UBE3B-204ENST00000449510 NUP58Q9BVL2 599 aa13.72□□□□□ -0.21
UBE3B-204ENST00000449510 KRIT1O00522 736 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 EPHB4P54760 987 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 RDH13Q8NBN7 331 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 SPATA4Q8NEY3 305 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 LSM14BQ9BX40 385 aaKnown RBP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 MLXIPLQ9NP71 852 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 STIM2Q9P246 746 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 MYO1AQ9UBC5 1043 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms