RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 KRT32Q14532 448 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 CATIPQ7Z7H3 387 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 DPP9Q86TI2 863 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 ZNF654Q8IZM8 581 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 USP6NLQ92738 828 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 TMEM87BQ96K49 555 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 RANBP17Q9H2T7 1088 aaKnown RBP13.92□□□□□ -0.18
RFC4-208ENST00000447345 CCPG1Q9ULG6 757 aa13.92□□□□□ -0.18
RFC4-208ENST00000447345 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 ATP2A1O14983 1001 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 HMGCRP04035 888 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 PGK2P07205 417 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 FDX1P10109 184 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 RXRAP19793 462 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 COPB2P35606 906 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 KCTD2Q14681 263 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 GRM4Q14833 912 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 MTFR1Q15390 333 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 IFFO2Q5TF58 517 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 NPLOC4Q8TAT6 608 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 USP26Q9BXU7 913 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 GTF3C3Q9Y5Q9 886 aa13.91□□□□□ -0.18
RFC4-208ENST00000447345 ICAM1P05362 532 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 UBXN2AP68543 259 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 FGD1P98174 961 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 CDC37Q16543 378 aaPredicted RBP13.9□□□□□ -0.18
RFC4-208ENST00000447345 TSGA10IPQ3SY00 556 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 USH1GQ495M9 461 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 DHX32Q7L7V1 743 aaKnown RBP13.9□□□□□ -0.18
RFC4-208ENST00000447345 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 KCNB2Q92953 911 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 ACAD9Q9H845 621 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 FLRT1Q9NZU1 646 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 MAD2L2Q9UI95 211 aa13.9□□□□□ -0.18
RFC4-208ENST00000447345 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 KLRF2D3W0D1 207 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 STRNO43815 780 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 COBLO75128 1261 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 DDAH1O94760 285 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 XRCC5P13010 732 aaKnown RBP13.89□□□□□ -0.19
RFC4-208ENST00000447345 CCL5P13501 91 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 CASTP20810 708 aaKnown RBP13.89□□□□□ -0.19
RFC4-208ENST00000447345 TROAPQ12815 778 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 MUM1L1Q5H9M0 696 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 BLOC1S2Q6QNY1 142 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 ANKRD35Q8N283 1001 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
RFC4-208ENST00000447345 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 TRERF1Q96PN7 1200 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 UNC93B1Q9H1C4 597 aa13.89□□□□□ -0.19
RFC4-208ENST00000447345 NAP1L2Q9ULW6 460 aaPredicted RBP13.89□□□□□ -0.19
RFC4-208ENST00000447345 BRCA2P51587 3418 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
RFC4-208ENST00000447345 SEC24BO95487 1268 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
RFC4-208ENST00000447345 CYP2C19P33261 490 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 LIFRP42702 1097 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 EXOSC10Q01780 885 aaKnown RBP13.88□□□□□ -0.19
RFC4-208ENST00000447345 QRICH1Q2TAL8 776 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 ABRAQ8N0Z2 381 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 CHST13Q8NET6 341 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 TMEM106CQ9BVX2 250 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 RNF208Q9H0X6 261 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 FBXO40Q9UH90 709 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 WDR19Q8NEZ3 1342 aa13.88□□□□□ -0.19
RFC4-208ENST00000447345 NFIBO00712 420 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
RFC4-208ENST00000447345 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
RFC4-208ENST00000447345 HOXC6P09630 235 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 RPS6KB1P23443 525 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 NSMFQ6X4W1 530 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 Q6ZUG5 572 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 MAML3Q96JK9 1138 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
RFC4-208ENST00000447345 JMJD4Q9H9V9 463 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 A1CFQ9NQ94 594 aaKnown RBP13.87□□□□□ -0.19
RFC4-208ENST00000447345 SLC5A4Q9NY91 659 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
RFC4-208ENST00000447345 KLF18A0A0U1RQI7 1052 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 PSMA5P28066 241 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 KIF5BP33176 963 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 CACNB2Q08289 660 aaPredicted RBP13.86□□□□□ -0.19
RFC4-208ENST00000447345 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 TKFCQ3LXA3 575 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 MFSD14CQ5VZR4 134 aa13.86□□□□□ -0.19
RFC4-208ENST00000447345 APOA5Q6Q788 366 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms