RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 PPIGQ13427 754 aaKnown RBP eCLIP11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 ADAMTS19Q8TE59 1207 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 MMP19Q99542 508 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 CCDC8Q9H0W5 538 aaPredicted RBP11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 PRDM12Q9H4Q4 367 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 SH2D4AQ9H788 454 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 SWAP70Q9UH65 585 aa11.96□□□□□ -0.49
UBE2D4-206ENST00000446008 XIRP2A4UGR9 3374 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 MAGEB6P1A0A0J9YX57 407 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 PGK2P07205 417 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 KCTD2Q14681 263 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 KCNA10Q16322 511 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 MSL3Q8N5Y2 521 aaKnown RBP11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 CRNKL1Q9BZJ0 848 aaKnown RBP11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 MCM9Q9NXL9 1143 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 FAM184BQ9ULE4 1060 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 TNNQ9UQP3 1299 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 TCF20Q9UGU0 1960 aaKnown RBP11.95□□□□□ -0.5
UBE2D4-206ENST00000446008 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 GBF1Q92538 1859 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 GRXCR1A8MXD5 290 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 TK2O00142 265 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 COPB2P35606 906 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 STAT3P40763 770 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 ADGRE1Q14246 886 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 MAMDC4Q6UXC1 1216 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 CCDC129Q6ZRS4 1044 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 SPICE1Q8N0Z3 855 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 TMEM199Q8N511 208 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 REPS2Q8NFH8 660 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 CCDC17Q96LX7 622 aa11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 DCP1AQ9NPI6 582 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 ZNF214Q9UL59 606 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-206ENST00000446008 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 VWA5AO00534 786 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 BCAR3O75815 825 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 CSF2RAP15509 400 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 ICA1Q05084 483 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 RAB30Q15771 203 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 PSRC1Q6PGN9 363 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 ZNF365Q70YC5 407 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 LENG1Q96BZ8 264 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
UBE2D4-206ENST00000446008 ARVCFO00192 962 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 AKR1B1P15121 316 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 TTF1Q15361 905 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 CCDC85BQ15834 202 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 SLC9C2Q5TAH2 1124 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 PCSK9Q8NBP7 692 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 SDR42E1Q8WUS8 393 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 HERVK_113Q902F9 699 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 ZBED2Q9BTP6 218 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 C1QTNF1Q9BXJ1 281 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 PPP1R9AQ9ULJ8 1098 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 TRANK1O15050 2925 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 MCM3APO60318 1980 aa11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-206ENST00000446008 DNAJC25-GNG10A0A024R161 153 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 A0A0U1RQG5 324 aaPredicted RBP11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 TCRBV5S4A2TA0A5A2 114 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 MYADML2A6NDP7 307 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 ASGR1P07306 291 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 ACRP10323 421 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 CYP2D6P10635 497 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 BMP1P13497 986 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 PDE6AP16499 860 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 IGFBP4P22692 258 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 GJA9P57773 515 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 NKX3-2P78367 333 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 CLEC10AQ8IUN9 316 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 FAM126BQ8IXS8 530 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 TMEM57Q8N5G2 664 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 IL27Q8NEV9 243 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 FRAT1Q92837 279 aaPredicted RBP11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 UPF3AQ9H1J1 476 aaKnown RBP11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 IL23AQ9NPF7 189 aa11.91□□□□□ -0.5
UBE2D4-206ENST00000446008 CD4P01730 458 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 FGBP02675 491 aa11.9□□□□□ -0.5
UBE2D4-206ENST00000446008 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms