RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 MFSD14CQ5VZR4 134 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 CYB5R4Q7L1T6 521 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TRIB2Q92519 343 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 USP6NLQ92738 828 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 RNF208Q9H0X6 261 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 ACAD9Q9H845 621 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 RAVER2Q9HCJ3 691 aaKnown RBP12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 GPCPD1Q9NPB8 672 aa12.09□□□□□ -0.47
HLA-DQB1-206ENST00000443574 PRC1O43663 620 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ICAM1P05362 532 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 STOX1Q6ZVD7 989 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RASGRP2Q7LDG7 609 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MB21D2Q8IYB1 491 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ANKRD35Q8N283 1001 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 HMX1Q9NP08 348 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CCPG1Q9ULG6 757 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 LRRC37A2A6NM11 1700 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PFASO15067 1338 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RPTORQ8N122 1335 aa12.08□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 GJB1P08034 283 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ALAS1P13196 640 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SEC23AQ15436 765 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 OLFML2BQ68BL8 750 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CCDC174Q6PII3 467 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NFXL1Q6ZNB6 911 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RNF146Q9NTX7 359 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 LCTP09848 1927 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 WDR19Q8NEZ3 1342 aa12.07□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SMCHD1A6NHR9 2005 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 BRCA2P51587 3418 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DDAH1O94760 285 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CALM1P0DP23 149 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CALM2P0DP24 149 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CALM3P0DP25 149 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 KIF5BP33176 963 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SLC16A2P36021 539 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 FGD1P98174 961 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MLLT1Q03111 559 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TRAF1Q13077 416 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MTFR1Q15390 333 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CHST3Q7LGC8 479 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TRERF1Q96PN7 1200 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DIS3Q9Y2L1 958 aaKnown RBP12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TAF6LQ9Y6J9 622 aa12.06□□□□□ -0.48
HLA-DQB1-206ENST00000443574 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MSCO60682 206 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 GJA8P48165 433 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RGS19P49795 217 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ANTXR2P58335 489 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CCL14Q16627 93 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MAP3K21Q5TCX8 1036 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SYNE3Q6ZMZ3 975 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MSL3Q8N5Y2 521 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 U2AF1L4Q8WU68 220 aaKnown RBP12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PAK6Q9NQU5 681 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 RIPK3Q9Y572 518 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ZNF536O15090 1300 aa12.05□□□□□ -0.48
HLA-DQB1-206ENST00000443574 KLRF2D3W0D1 207 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SH2B2O14492 632 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PGK2P07205 417 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PSMA5P28066 241 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 HSPA4P34932 840 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 LIFRP42702 1097 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 GNAQP50148 359 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 GRM4Q14833 912 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 MAP3K14Q99558 947 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 LY9Q9HBG7 655 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 ABCB11O95342 1321 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
HLA-DQB1-206ENST00000443574 BAZ2BQ9UIF8 2168 aaKnown RBP12.03□□□□□ -0.48
HLA-DQB1-206ENST00000443574 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms