RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 SMARCC1Q92922 1105 aaPredicted RBP15.81■□□□□ 0.12
MCF2L-218ENST00000442625 MED4Q9NPJ6 270 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 EHD2Q9NZN4 543 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 RWDD2AQ9UIY3 292 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 LRRC10BA6NIK2 292 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 B4DLN1 442 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 USP17L12C9JPN9 530 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 USP17L21D6R901 530 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 RPS6KA5O75582 802 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 RPN1P04843 607 aaKnown RBP15.81■□□□□ 0.12
MCF2L-218ENST00000442625 TUBB2AQ13885 445 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 TMTC3Q6ZXV5 915 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 KRT26Q7Z3Y9 468 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 OR8K1Q8NGG5 319 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 TUBB2BQ9BVA1 445 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 SELENOOQ9BVL4 669 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 KAT14Q9H8E8 782 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 JADE2Q9NQC1 790 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 LUC7L2Q9Y383 392 aaKnown RBP15.81■□□□□ 0.12
MCF2L-218ENST00000442625 MYH6P13533 1939 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 NUP98P52948 1817 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 SEMA3EO15041 775 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 ERCC3P19447 782 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 CCT5P48643 541 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 CORO7P57737 925 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 SLC7A5Q01650 507 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 COG1Q8WTW3 980 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 MTA3Q9BTC8 594 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
MCF2L-218ENST00000442625 NIP7Q9Y221 180 aaKnown RBP eCLIP15.81■□□□□ 0.12
MCF2L-218ENST00000442625 LRP5O75197 1615 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 CNTNAP5Q8WYK1 1306 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 GTF2A1P52655 376 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-218ENST00000442625 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-218ENST00000442625 MB21D1Q8N884 522 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 ANAPC4Q9UJX5 808 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 DOCK2Q92608 1830 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 PLEKP08567 350 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-218ENST00000442625 CXCR5P32302 372 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 COL4A1P02462 1669 aa15.8■□□□□ 0.12
MCF2L-218ENST00000442625 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 PSMD14O00487 310 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 CYP2D6P10635 497 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 LIG3P49916 1009 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 KCTD19Q17RG1 926 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MICALL1Q8N3F8 863 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 GPKOWQ92917 476 aaPredicted RBP eCLIP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 CRACR2AQ9BSW2 395 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 ACBD3Q9H3P7 528 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MYO1AQ9UBC5 1043 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MKRN1Q9UHC7 482 aaKnown RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 JAG2Q9Y219 1238 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 ZBTB12Q9Y330 459 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 JRKLQ9Y4A0 524 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 EIF5P55010 431 aaKnown RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 INTS5Q6P9B9 1019 aaKnown RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 ANKRD20A12PQ8NF67 263 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MYCBPQ99417 103 aaPredicted RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 RBM28Q9NW13 759 aaKnown RBP15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MTMR7Q9Y216 660 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 MYH2Q9UKX2 1941 aa15.79■□□□□ 0.12
MCF2L-218ENST00000442625 BMP15O95972 392 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 IDEP14735 1019 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 AARSP49588 968 aaKnown RBP eCLIP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 PPP2R5BQ15173 497 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 ICE2Q659A1 982 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 CTCFLQ8NI51 663 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 BCORQ6W2J9 1755 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 GTPBP6O43824 516 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 SCG2P13521 617 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 CRKLP46109 303 aaKnown RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 MSL3Q8N5Y2 521 aaKnown RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 HAUS4Q9H6D7 363 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 DMGDHQ9UI17 866 aaKnown RBP15.78■□□□□ 0.12
MCF2L-218ENST00000442625 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 ANKRD36CQ5JPF3 1778 aa15.78■□□□□ 0.12
MCF2L-218ENST00000442625 ARAP2Q8WZ64 1704 aa15.77■□□□□ 0.12
MCF2L-218ENST00000442625 KLRK1P26718 216 aa15.77■□□□□ 0.12
MCF2L-218ENST00000442625 CCNI2Q6ZMN8 369 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-218ENST00000442625 SND1Q7KZF4 910 aaKnown RBP eCLIP15.77■□□□□ 0.12
MCF2L-218ENST00000442625 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
MCF2L-218ENST00000442625 TRIM47Q96LD4 638 aa15.77■□□□□ 0.12
MCF2L-218ENST00000442625 FAM205AQ6ZU69 1335 aa15.77■□□□□ 0.12
MCF2L-218ENST00000442625 ITGB4P16144 1822 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 NTSR2O95665 410 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.11
MCF2L-218ENST00000442625 ATP6V1AP38606 617 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 STAT6P42226 847 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 HPS3Q969F9 1004 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 LRRC1Q9BTT6 524 aa15.77■□□□□ 0.11
MCF2L-218ENST00000442625 NHEJ1Q9H9Q4 299 aaPredicted RBP15.77■□□□□ 0.11
MCF2L-218ENST00000442625 MLXIPQ9HAP2 919 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms