RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 CABP5Q9NP86 173 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 CEP126Q9P2H0 1117 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 MUTYHQ9UIF7 546 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 TRANK1O15050 2925 aa7.71□□□□□ -1.18
HDAC6-210ENST00000441703 ZNFX1Q9P2E3 1918 aaKnown RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 TMEM221A6NGB7 291 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 M0R296 226 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 DYNC1I1O14576 645 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 ZNF500O60304 480 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 ARHGEF15O94989 841 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 BAG3O95817 575 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 IGHDP01880 384 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 PGK2P07205 417 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 MCM5P33992 734 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 DDIT3P35638 169 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 KCNJ6P48051 423 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 HERC4Q5GLZ8 1057 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 METTL16Q86W50 562 aaKnown RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 MAPKAPK5Q8IW41 473 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 WDR63Q8IWG1 891 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 SH3RF3Q8TEJ3 882 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 ZNF384Q8TF68 577 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 EDAQ92838 391 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 ZBED2Q9BTP6 218 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 WNT8AQ9H1J5 351 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 RAI14Q9P0K7 980 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 MTUS1Q9ULD2 1270 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 TRPC6Q9Y210 931 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 DIS3Q9Y2L1 958 aaKnown RBP7.7□□□□□ -1.18
HDAC6-210ENST00000441703 WDFY4Q6ZS81 3184 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 MYH1P12882 1939 aa7.7□□□□□ -1.18
HDAC6-210ENST00000441703 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 KDM4AO75164 1064 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 CABYRO75952 493 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 PLCG2P16885 1265 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 ADORA1P30542 326 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 IRS1P35568 1242 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 ZNF792Q3KQV3 632 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 ASCL5Q7RTU5 278 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 FBXL6Q8N531 539 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 NEK9Q8TD19 979 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 ACER1Q8TDN7 264 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 TGFBRAP1Q8WUH2 860 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 SNX21Q969T3 373 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 NSUN4Q96CB9 384 aaKnown RBP7.69□□□□□ -1.18
HDAC6-210ENST00000441703 SEZ6LQ9BYH1 1024 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 FTOQ9C0B1 505 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC6-210ENST00000441703 USP44Q9H0E7 712 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 SIL1Q9H173 461 aa7.69□□□□□ -1.18
HDAC6-210ENST00000441703 PARP14Q460N5 1801 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 PTPRZ1P23471 2315 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 MED19A0JLT2 244 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 PRR23AA6NEV1 266 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 H0Y858 1186 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 ZEB2O60315 1214 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 FLOT1O75955 427 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 RGS20O76081 388 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 DSG3P32926 999 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 IL15P40933 162 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 GJA9P57773 515 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 IRX5P78411 483 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 PDE4CQ08493 712 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 DMTNQ08495 405 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 ITGA7Q13683 1181 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 ABCB5Q2M3G0 1257 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 CERKLQ49MI3 558 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 TIGD5Q53EQ6 642 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 CLEC17AQ6ZS10 378 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 TRIM67Q6ZTA4 783 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 NOL8Q76FK4 1167 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 SPRED2Q7Z698 418 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 MSL3Q8N5Y2 521 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 ANP32BQ92688 251 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 TGS1Q96RS0 853 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 GTPBP4Q9BZE4 634 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 GZF1Q9H116 711 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 TRPV6Q9H1D0 765 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 UPF3AQ9H1J1 476 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 TLR9Q9NR96 1032 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 AATFQ9NY61 560 aaKnown RBP eCLIP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 SAP30BPQ9UHR5 308 aaKnown RBP7.68□□□□□ -1.18
HDAC6-210ENST00000441703 CTNNA3Q9UI47 895 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 PALD1Q9ULE6 856 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 CFAP54Q96N23 3096 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 PTPRCP08575 1304 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 FLT1P17948 1338 aa7.68□□□□□ -1.18
HDAC6-210ENST00000441703 BAHCC1Q9P281 2608 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 PROB1E7EW31 1015 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 B4GALT4O60513 344 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 SUPT20HL2P0C7V6 817 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 MSNP26038 577 aaKnown RBP7.67□□□□□ -1.18
HDAC6-210ENST00000441703 RFC2P35250 354 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 COPB2P35606 906 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 ACVR2BQ13705 512 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 MVPQ14764 893 aaKnown RBP7.67□□□□□ -1.18
HDAC6-210ENST00000441703 PTPROQ16827 1216 aa7.67□□□□□ -1.18
HDAC6-210ENST00000441703 CXCL17Q6UXB2 119 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms