RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 DHX16O60231 1041 aaKnown RBP23.58■■□□□ 1.37
TSSC4-206ENST00000440813 HMGB1P09429 215 aaKnown RBP23.58■■□□□ 1.37
TSSC4-206ENST00000440813 XRCC5P13010 732 aaKnown RBP23.58■■□□□ 1.37
TSSC4-206ENST00000440813 TROAPQ12815 778 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 KCTD2Q14681 263 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 GRM4Q14833 912 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 ZNF654Q8IZM8 581 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 APBA2Q99767 749 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 MYL10Q9BUA6 226 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 VAT1LQ9HCJ6 419 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 MAD2L2Q9UI95 211 aa23.58■■□□□ 1.37
TSSC4-206ENST00000440813 KLRF2D3W0D1 207 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 ALAS1P13196 640 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 TAL1P17542 331 aaPredicted RBP23.57■■□□□ 1.36
TSSC4-206ENST00000440813 LIFRP42702 1097 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 CCL14Q16627 93 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 ADGRF4Q8IZF3 695 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 ABRAQ8N0Z2 381 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 TRIB2Q92519 343 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 CCPG1Q9ULG6 757 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 WDR19Q8NEZ3 1342 aa23.57■■□□□ 1.36
TSSC4-206ENST00000440813 CENPFP49454 3210 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 PALM3A6NDB9 673 aaPredicted RBP23.56■■□□□ 1.36
TSSC4-206ENST00000440813 COBLO75128 1261 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 INHAP05111 366 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 ICAM1P05362 532 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 UBXN2AP68543 259 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 BLOC1S2Q6QNY1 142 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 CHST13Q8NET6 341 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 NPLOC4Q8TAT6 608 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 RNF146Q9NTX7 359 aa23.56■■□□□ 1.36
TSSC4-206ENST00000440813 DDAH1O94760 285 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 SEC24BO95487 1268 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 PGK2P07205 417 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 CASTP20810 708 aaKnown RBP23.55■■□□□ 1.36
TSSC4-206ENST00000440813 PSMA5P28066 241 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 TRIM32Q13049 653 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 MTFR1Q15390 333 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 RAB11FIP4Q86YS3 637 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 TRERF1Q96PN7 1200 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 FBXO40Q9UH90 709 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 SLC12A7Q9Y666 1083 aa23.55■■□□□ 1.36
TSSC4-206ENST00000440813 ZNFX1Q9P2E3 1918 aaKnown RBP23.55■■□□□ 1.36
TSSC4-206ENST00000440813 HMGCRP04035 888 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 HOXC6P09630 235 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 RXRAP19793 462 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 SOX10P56693 466 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 FGD1P98174 961 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 CDC37Q16543 378 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-206ENST00000440813 TKFCQ3LXA3 575 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 TRMT44Q8IYL2 757 aaKnown RBP23.54■■□□□ 1.36
TSSC4-206ENST00000440813 CTCFLQ8NI51 663 aaPredicted RBP23.54■■□□□ 1.36
TSSC4-206ENST00000440813 DDX11Q96FC9 970 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 ACAD9Q9H845 621 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 JMJD4Q9H9V9 463 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 FLRT1Q9NZU1 646 aa23.54■■□□□ 1.36
TSSC4-206ENST00000440813 EIF5BO60841 1220 aaKnown RBP23.53■■□□□ 1.36
TSSC4-206ENST00000440813 RPS6KB1P23443 525 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 MUM1L1Q5H9M0 696 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 IFFO2Q5TF58 517 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 SGMS1Q86VZ5 419 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 CCDC144CPQ8IYA2 1237 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 ANKRD35Q8N283 1001 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 SLC5A4Q9NY91 659 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 ZNF236Q9UL36 1845 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 SMCHD1A6NHR9 2005 aa23.53■■□□□ 1.36
TSSC4-206ENST00000440813 USH1GQ495M9 461 aa23.52■■□□□ 1.36
TSSC4-206ENST00000440813 SYNE3Q6ZMZ3 975 aa23.52■■□□□ 1.36
TSSC4-206ENST00000440813 Q6ZUG5 572 aa23.52■■□□□ 1.36
TSSC4-206ENST00000440813 MAP3K14Q99558 947 aa23.52■■□□□ 1.36
TSSC4-206ENST00000440813 TMEM106CQ9BVX2 250 aa23.52■■□□□ 1.36
TSSC4-206ENST00000440813 CALM1P0DP23 149 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 CALM2P0DP24 149 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 CALM3P0DP25 149 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 CCL5P13501 91 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 KIF5BP33176 963 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 SLC35G1Q2M3R5 365 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 QRICH1Q2TAL8 776 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 C8orf34Q49A92 452 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 MICU3Q86XE3 530 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 UNC93B1Q9H1C4 597 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 BRPF3Q9ULD4 1205 aa23.51■■□□□ 1.35
TSSC4-206ENST00000440813 ZNF792Q3KQV3 632 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 MFSD14CQ5VZR4 134 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 APOA5Q6Q788 366 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.5■■□□□ 1.35
TSSC4-206ENST00000440813 HOMER1Q86YM7 354 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 MAML3Q96JK9 1138 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 RNF208Q9H0X6 261 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 ZSWIM6Q9HCJ5 1215 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 A1CFQ9NQ94 594 aaKnown RBP23.5■■□□□ 1.35
TSSC4-206ENST00000440813 PNMA2Q9UL42 364 aa23.5■■□□□ 1.35
TSSC4-206ENST00000440813 NAP1L2Q9ULW6 460 aaPredicted RBP23.5■■□□□ 1.35
TSSC4-206ENST00000440813 KLF18A0A0U1RQI7 1052 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 CYTH3O43739 400 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 PRKAR2AP13861 404 aaKnown RBP23.49■■□□□ 1.35
TSSC4-206ENST00000440813 CYP2C19P33261 490 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 NSMFQ6X4W1 530 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
TSSC4-206ENST00000440813 PIBF1Q8WXW3 757 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms