RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TMEM87BQ96K49 555 aa21.07■□□□□ 0.96
CPSF4-205ENST00000440514 MYL10Q9BUA6 226 aa21.07■□□□□ 0.96
CPSF4-205ENST00000440514 FLRT1Q9NZU1 646 aa21.07■□□□□ 0.96
CPSF4-205ENST00000440514 PLXNA1Q9UIW2 1896 aa21.07■□□□□ 0.96
CPSF4-205ENST00000440514 COBLO75128 1261 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 PGK2P07205 417 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 ALAS1P13196 640 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 CPA1P15085 419 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 UBXN2AP68543 259 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 KCTD2Q14681 263 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 GRM4Q14833 912 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 ZNF654Q8IZM8 581 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 ABRAQ8N0Z2 381 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 JAKMIP1Q96N16 626 aaKnown RBP21.06■□□□□ 0.96
CPSF4-205ENST00000440514 MTA3Q9BTC8 594 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 USP26Q9BXU7 913 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 RNF146Q9NTX7 359 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 MAD2L2Q9UI95 211 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 CCPG1Q9ULG6 757 aa21.06■□□□□ 0.96
CPSF4-205ENST00000440514 ZNFX1Q9P2E3 1918 aaKnown RBP21.06■□□□□ 0.96
CPSF4-205ENST00000440514 ICAM1P05362 532 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 HOXC6P09630 235 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 CCL5P13501 91 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 TROAPQ12815 778 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 CATIPQ7Z7H3 387 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 DPP9Q86TI2 863 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 ADGRF4Q8IZF3 695 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 UNC93B1Q9H1C4 597 aa21.05■□□□□ 0.96
CPSF4-205ENST00000440514 WDR19Q8NEZ3 1342 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 CENPFP49454 3210 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 POTEFA5A3E0 1075 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 CCDC69A6NI79 296 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 KLRF2D3W0D1 207 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 EPB41L2O43491 1005 aaKnown RBP21.04■□□□□ 0.96
CPSF4-205ENST00000440514 DHX16O60231 1041 aaKnown RBP21.04■□□□□ 0.96
CPSF4-205ENST00000440514 EXOSC10Q01780 885 aaKnown RBP21.04■□□□□ 0.96
CPSF4-205ENST00000440514 CDC37Q16543 378 aaPredicted RBP21.04■□□□□ 0.96
CPSF4-205ENST00000440514 DHX32Q7L7V1 743 aaKnown RBP21.04■□□□□ 0.96
CPSF4-205ENST00000440514 RAB11FIP4Q86YS3 637 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 CHST13Q8NET6 341 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 ACAD9Q9H845 621 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 FBXO40Q9UH90 709 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 SMCHD1A6NHR9 2005 aa21.04■□□□□ 0.96
CPSF4-205ENST00000440514 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
CPSF4-205ENST00000440514 DDAH1O94760 285 aa21.03■□□□□ 0.96
CPSF4-205ENST00000440514 RXRAP19793 462 aa21.03■□□□□ 0.96
CPSF4-205ENST00000440514 SLC35G1Q2M3R5 365 aa21.03■□□□□ 0.96
CPSF4-205ENST00000440514 MUM1L1Q5H9M0 696 aa21.03■□□□□ 0.96
CPSF4-205ENST00000440514 TRMT44Q8IYL2 757 aaKnown RBP21.03■□□□□ 0.96
CPSF4-205ENST00000440514 TRERF1Q96PN7 1200 aa21.03■□□□□ 0.96
CPSF4-205ENST00000440514 PRKAR2AP13861 404 aaKnown RBP21.02■□□□□ 0.96
CPSF4-205ENST00000440514 LIFRP42702 1097 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 TKFCQ3LXA3 575 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.02■□□□□ 0.96
CPSF4-205ENST00000440514 MAML3Q96JK9 1138 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 TMEM106CQ9BVX2 250 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 RNF208Q9H0X6 261 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 JMJD4Q9H9V9 463 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 VAT1LQ9HCJ6 419 aa21.02■□□□□ 0.96
CPSF4-205ENST00000440514 LCTP09848 1927 aa21.02■□□□□ 0.95
CPSF4-205ENST00000440514 MYH6P13533 1939 aa21.02■□□□□ 0.95
CPSF4-205ENST00000440514 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
CPSF4-205ENST00000440514 CYP2C19P33261 490 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 CACNB2Q08289 660 aaPredicted RBP21.01■□□□□ 0.95
CPSF4-205ENST00000440514 QRICH1Q2TAL8 776 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 USH1GQ495M9 461 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 MAP3K21Q5TCX8 1036 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 BLOC1S2Q6QNY1 142 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 CCDC144CPQ8IYA2 1237 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 ANKRD35Q8N283 1001 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
CPSF4-205ENST00000440514 SLC5A4Q9NY91 659 aa21.01■□□□□ 0.95
CPSF4-205ENST00000440514 DNAJC25-GNG10A0A024R161 153 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
CPSF4-205ENST00000440514 ZNF792Q3KQV3 632 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 OLFML2BQ68BL8 750 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 SGMS1Q86VZ5 419 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 TMTC2Q8N394 836 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 CTCFLQ8NI51 663 aaPredicted RBP21■□□□□ 0.95
CPSF4-205ENST00000440514 XRN2Q9H0D6 950 aaKnown RBP eCLIP21■□□□□ 0.959e-6■■□□□ 13.2
CPSF4-205ENST00000440514 SLC12A7Q9Y666 1083 aa21■□□□□ 0.95
CPSF4-205ENST00000440514 NFIBO00712 420 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 SEC24BO95487 1268 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 IGHA2P01877 340 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 RPS6KB1P23443 525 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 MFSD14CQ5VZR4 134 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 NSMFQ6X4W1 530 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 MICU3Q86XE3 530 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 BRPF3Q9ULD4 1205 aa20.99■□□□□ 0.95
CPSF4-205ENST00000440514 CYTH3O43739 400 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 PLEKHA8P1O95397 391 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 EN2P19622 333 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-205ENST00000440514 CCND3P30281 292 aaPredicted RBP20.98■□□□□ 0.95
CPSF4-205ENST00000440514 C8orf34Q49A92 452 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 APOA5Q6Q788 366 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 HOMER1Q86YM7 354 aa20.98■□□□□ 0.95
CPSF4-205ENST00000440514 FGD4Q96M96 766 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms