RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ZBTB5O15062 677 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 TXLNAP40222 546 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 ICA1Q05084 483 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 SEPT2Q15019 361 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 DLGAP5Q15398 846 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 ABCB5Q2M3G0 1257 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 CT47A1Q5JQC4 288 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-202ENST00000439724 FKBP1CQ5VVH2 108 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 TTBK2Q6IQ55 1244 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 SIAH1Q8IUQ4 282 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 DRC7Q8IY82 874 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 GRAMD1CQ8IYS0 662 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 IQUBQ8NA54 791 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 MTMR14Q8NCE2 650 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
SMAD3-202ENST00000439724 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
SMAD3-202ENST00000439724 PTGS1P23219 599 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 DPYDQ12882 1025 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 SHROOM1Q2M3G4 852 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-202ENST00000439724 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 PDXDC2PQ6P474 469 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 OGFOD1Q8N543 542 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 FAM151AQ8WW52 585 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 COA7Q96BR5 231 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 ZNF830Q96NB3 372 aaPredicted RBP13.36□□□□□ -0.27
SMAD3-202ENST00000439724 GSDMAQ96QA5 445 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
SMAD3-202ENST00000439724 PPP1R11O60927 126 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-202ENST00000439724 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 POLD1P28340 1107 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 SLC1A4P43007 532 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
SMAD3-202ENST00000439724 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 CCDC186Q7Z3E2 898 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 TBCKQ8TEA7 893 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 GMCL1Q96IK5 515 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 AK8Q96MA6 479 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 BIN2Q9UBW5 565 aaPredicted RBP13.35□□□□□ -0.27
SMAD3-202ENST00000439724 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
SMAD3-202ENST00000439724 USP17L10C9JJH3 530 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 GTPBP6O43824 516 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 NEMFO60524 1076 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 OFD1O75665 1012 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 GDF11O95390 407 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 SLC16A2P36021 539 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 AFMP43652 599 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 DALRD3Q5D0E6 543 aaKnown RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 ZBED3Q96IU2 234 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 TCP10L2B9ZVM9 353 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 ZBTB7AO95365 584 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 GH2P01242 217 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 FANCCQ00597 558 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 CXCL9Q07325 125 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 ENOX1Q8TC92 643 aaKnown RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 CUL5Q93034 780 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.34□□□□□ -0.271e-8■■■■□ 20.2
SMAD3-202ENST00000439724 DISC1Q9NRI5 854 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 TMEM260Q9NX78 707 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 IFNKQ9P0W0 207 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
SMAD3-202ENST00000439724 ZBTB12Q9Y330 459 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-202ENST00000439724 F5H6K3 240 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 STAT6P42226 847 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 MMP14P50281 582 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 MRPL12P52815 198 aaKnown RBP13.33□□□□□ -0.28
SMAD3-202ENST00000439724 JAG1P78504 1218 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 KLRC3Q07444 240 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 RRP1BQ14684 758 aaKnown RBP13.33□□□□□ -0.28
SMAD3-202ENST00000439724 QRICH1Q2TAL8 776 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 KIAA1524Q8TCG1 905 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 XPO4Q9C0E2 1151 aaKnown RBP13.33□□□□□ -0.28
SMAD3-202ENST00000439724 TAOK3Q9H2K8 898 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 SPTLC3Q9NUV7 552 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
SMAD3-202ENST00000439724 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 TBC1D12O60347 775 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 NDUFB10O96000 172 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 MYL1P05976 194 aa13.32□□□□□ -0.28
SMAD3-202ENST00000439724 UBA7P41226 1012 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms