RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 GJA8P48165 433 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 NT5C2P49902 561 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 MLLT1Q03111 559 aaPredicted RBP15.57■□□□□ 0.08
LINC00399-201ENST00000439008 MUM1L1Q5H9M0 696 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00399-201ENST00000439008 DPP9Q86TI2 863 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 STAG2Q8N3U4 1231 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 NCOA7Q8NI08 942 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 U2AF1L4Q8WU68 220 aaKnown RBP15.57■□□□□ 0.08
LINC00399-201ENST00000439008 DEFB118Q96PH6 123 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 UBAC1Q9BSL1 405 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.57■□□□□ 0.08
LINC00399-201ENST00000439008 RANBP17Q9H2T7 1088 aaKnown RBP15.57■□□□□ 0.08
LINC00399-201ENST00000439008 KAT14Q9H8E8 782 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 HOMER2Q9NSB8 354 aa15.57■□□□□ 0.08
LINC00399-201ENST00000439008 OAZ1P54368 228 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 TRDNQ13061 729 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 ADCK5Q3MIX3 580 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 CCDC178Q5BJE1 867 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 PRAMEF19Q5SWL8 479 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 IFIT1BQ5T764 474 aaKnown RBP15.56■□□□□ 0.08
LINC00399-201ENST00000439008 UBE2Q1Q7Z7E8 422 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 RPTORQ8N122 1335 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 FRMPD3Q5JV73 1810 aa15.56■□□□□ 0.08
LINC00399-201ENST00000439008 IFIT3O14879 490 aaKnown RBP15.55■□□□□ 0.08
LINC00399-201ENST00000439008 SGPL1O95470 568 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 FDX1P10109 184 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
LINC00399-201ENST00000439008 OLFML2BQ68BL8 750 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 RALYLQ86SE5 291 aaKnown RBP15.55■□□□□ 0.08
LINC00399-201ENST00000439008 CRISPLD2Q9H0B8 497 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 LY9Q9HBG7 655 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 RNF146Q9NTX7 359 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 MAD2L2Q9UI95 211 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 DDX49Q9Y6V7 483 aaKnown RBP15.55■□□□□ 0.08
LINC00399-201ENST00000439008 MYH6P13533 1939 aa15.55■□□□□ 0.08
LINC00399-201ENST00000439008 ASTN1O14525 1302 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 PRC1O43663 620 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 ICAM1P05362 532 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 ALAS1P13196 640 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 CYBAP13498 195 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 CNTN2Q02246 1040 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 KCTD2Q14681 263 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 LHX8Q68G74 356 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 TRMT44Q8IYL2 757 aaKnown RBP15.54■□□□□ 0.08
LINC00399-201ENST00000439008 PURBQ96QR8 312 aaKnown RBP15.54■□□□□ 0.08
LINC00399-201ENST00000439008 LRRC2Q9BYS8 371 aa15.54■□□□□ 0.08
LINC00399-201ENST00000439008 HMX1Q9NP08 348 aaPredicted RBP15.54■□□□□ 0.08
LINC00399-201ENST00000439008 A1CFQ9NQ94 594 aaKnown RBP15.54■□□□□ 0.08
LINC00399-201ENST00000439008 CTDP1Q9Y5B0 961 aaPredicted RBP15.54■□□□□ 0.08
LINC00399-201ENST00000439008 CEP290O15078 2479 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 NFIBO00712 420 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 COPB2P35606 906 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 TROAPQ12815 778 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 TMEM67Q5HYA8 995 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 GPATCH4Q5T3I0 446 aaKnown RBP15.53■□□□□ 0.08
LINC00399-201ENST00000439008 ADGRF4Q8IZF3 695 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 CHST13Q8NET6 341 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 DIS3LQ8TF46 1054 aaKnown RBP15.53■□□□□ 0.08
LINC00399-201ENST00000439008 CLEC4DQ8WXI8 215 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 KCNB2Q92953 911 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 TCEANC2Q96MN5 208 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 MYL10Q9BUA6 226 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 CCPG1Q9ULG6 757 aa15.53■□□□□ 0.08
LINC00399-201ENST00000439008 PALM3A6NDB9 673 aaPredicted RBP15.52■□□□□ 0.08
LINC00399-201ENST00000439008 SOWAHBA6NEL2 793 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 SH2B2O14492 632 aaPredicted RBP15.52■□□□□ 0.08
LINC00399-201ENST00000439008 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
LINC00399-201ENST00000439008 CPA1P15085 419 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 WTAPQ15007 396 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 ASPRV1Q53RT3 343 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 MFSD14CQ5VZR4 134 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 ACAD9Q9H845 621 aa15.52■□□□□ 0.08
LINC00399-201ENST00000439008 DIS3Q9Y2L1 958 aaKnown RBP15.52■□□□□ 0.08
LINC00399-201ENST00000439008 ALPK3Q96L96 1907 aa15.52■□□□□ 0.07
LINC00399-201ENST00000439008 CYTH3O43739 400 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 PPP1R11O60927 126 aaPredicted RBP15.51■□□□□ 0.07
LINC00399-201ENST00000439008 SNAI1O95863 264 aaPredicted RBP15.51■□□□□ 0.07
LINC00399-201ENST00000439008 EXOSC10Q01780 885 aaKnown RBP15.51■□□□□ 0.07
LINC00399-201ENST00000439008 GRM4Q14833 912 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 ANO1Q5XXA6 986 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 CASC1Q6TDU7 716 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 ANKRD35Q8N283 1001 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 MTMR8Q96EF0 704 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 VAT1LQ9HCJ6 419 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 OGDHLQ9ULD0 1010 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 SNX14Q9Y5W7 946 aa15.51■□□□□ 0.07
LINC00399-201ENST00000439008 KLRF2D3W0D1 207 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 TFRCP02786 760 aaKnown RBP15.5■□□□□ 0.07
LINC00399-201ENST00000439008 ZNF865P0CJ78 1059 aaPredicted RBP15.5■□□□□ 0.07
LINC00399-201ENST00000439008 MCM5P33992 734 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 HSPA4P34932 840 aa15.5■□□□□ 0.07
LINC00399-201ENST00000439008 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms