RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CCDC69A6NI79 296 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 ALAS1P13196 640 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 CCL5P13501 91 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 USP26Q9BXU7 913 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 RNF208Q9H0X6 261 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 LY9Q9HBG7 655 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 CCPG1Q9ULG6 757 aa19.1■□□□□ 0.65
CTSD-205ENST00000438213 COL11A1P12107 1806 aaPredicted RBP19.09■□□□□ 0.65
CTSD-205ENST00000438213 WDR19Q8NEZ3 1342 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 KLRF2D3W0D1 207 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 DHX16O60231 1041 aaKnown RBP19.09■□□□□ 0.65
CTSD-205ENST00000438213 COBLO75128 1261 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 PSMA5P28066 241 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 SOX10P56693 466 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 MTFR1Q15390 333 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.65
CTSD-205ENST00000438213 ANKRD35Q8N283 1001 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 NPLOC4Q8TAT6 608 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 TRIB2Q92519 343 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 TRERF1Q96PN7 1200 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 MAP3K14Q99558 947 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 ACAD9Q9H845 621 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 SENP2Q9HC62 589 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
CTSD-205ENST00000438213 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
CTSD-205ENST00000438213 DIS3Q9Y2L1 958 aaKnown RBP19.09■□□□□ 0.65
CTSD-205ENST00000438213 KIAA0100Q14667 2235 aaKnown RBP19.08■□□□□ 0.65
CTSD-205ENST00000438213 RPTORQ8N122 1335 aa19.08■□□□□ 0.65
CTSD-205ENST00000438213 PALM3A6NDB9 673 aaPredicted RBP19.08■□□□□ 0.64
CTSD-205ENST00000438213 SH2B2O14492 632 aaPredicted RBP19.08■□□□□ 0.64
CTSD-205ENST00000438213 EXOSC10Q01780 885 aaKnown RBP19.08■□□□□ 0.64
CTSD-205ENST00000438213 TROAPQ12815 778 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 GRM4Q14833 912 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 CCL14Q16627 93 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 ADCK5Q3MIX3 580 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 OLFML2BQ68BL8 750 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 SYNE3Q6ZMZ3 975 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 ADGRF4Q8IZF3 695 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 NUP133Q8WUM0 1156 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 VAT1LQ9HCJ6 419 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 RNF146Q9NTX7 359 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 MAD2L2Q9UI95 211 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 SNX14Q9Y5W7 946 aa19.08■□□□□ 0.64
CTSD-205ENST00000438213 DDAH1O94760 285 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 PGK2P07205 417 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 GJB1P08034 283 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 CALM1P0DP23 149 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 CALM2P0DP24 149 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 CALM3P0DP25 149 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 CAPN2P17655 700 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 KIF5BP33176 963 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 FGD1P98174 961 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 ZNF654Q8IZM8 581 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 STAG2Q8N3U4 1231 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
CTSD-205ENST00000438213 JAKMIP1Q96N16 626 aaKnown RBP19.07■□□□□ 0.64
CTSD-205ENST00000438213 UNC93B1Q9H1C4 597 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 GPHNQ9NQX3 736 aaPredicted RBP19.07■□□□□ 0.64
CTSD-205ENST00000438213 SLC12A7Q9Y666 1083 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 PLXNB2O15031 1838 aa19.07■□□□□ 0.64
CTSD-205ENST00000438213 PRKAR2AP13861 404 aaKnown RBP19.06■□□□□ 0.64
CTSD-205ENST00000438213 ZNF792Q3KQV3 632 aa19.06■□□□□ 0.64
CTSD-205ENST00000438213 BLOC1S2Q6QNY1 142 aa19.06■□□□□ 0.64
CTSD-205ENST00000438213 LRRC2Q9BYS8 371 aa19.06■□□□□ 0.64
CTSD-205ENST00000438213 CPVLQ9H3G5 476 aa19.06■□□□□ 0.64
CTSD-205ENST00000438213 POTEFA5A3E0 1075 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 RGS19P49795 217 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 GNAQP50148 359 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 CACNB2Q08289 660 aaPredicted RBP19.05■□□□□ 0.64
CTSD-205ENST00000438213 TRIM32Q13049 653 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 CDC37Q16543 378 aaPredicted RBP19.05■□□□□ 0.64
CTSD-205ENST00000438213 MAP3K21Q5TCX8 1036 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 SGMS1Q86VZ5 419 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 MAML3Q96JK9 1138 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 LZTS2Q9BRK4 669 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 JMJD4Q9H9V9 463 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 FLRT1Q9NZU1 646 aa19.05■□□□□ 0.64
CTSD-205ENST00000438213 PFASO15067 1338 aa19.04■□□□□ 0.64
CTSD-205ENST00000438213 DNAJC25-GNG10A0A024R161 153 aa19.04■□□□□ 0.64
CTSD-205ENST00000438213 TRAF1Q13077 416 aa19.04■□□□□ 0.64
CTSD-205ENST00000438213 COL9A3Q14050 684 aaPredicted RBP19.04■□□□□ 0.64
CTSD-205ENST00000438213 FBXO11Q86XK2 927 aa19.04■□□□□ 0.64
CTSD-205ENST00000438213 MSL3Q8N5Y2 521 aaKnown RBP19.04■□□□□ 0.64
CTSD-205ENST00000438213 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.04■□□□□ 0.645e-7■■■■■ 28.2
CTSD-205ENST00000438213 ZNFX1Q9P2E3 1918 aaKnown RBP19.04■□□□□ 0.64
CTSD-205ENST00000438213 HTTP42858 3142 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 SMARCA1P28370 1054 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 CYP2C19P33261 490 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 GJA8P48165 433 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 MUM1L1Q5H9M0 696 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 NSMFQ6X4W1 530 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 TCEANC2Q96MN5 208 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 TINF2Q9BSI4 451 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 MYL10Q9BUA6 226 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
CTSD-205ENST00000438213 A1CFQ9NQ94 594 aaKnown RBP19.03■□□□□ 0.64
CTSD-205ENST00000438213 PAK6Q9NQU5 681 aaPredicted RBP19.03■□□□□ 0.64
CTSD-205ENST00000438213 ZBTB5O15062 677 aa19.02■□□□□ 0.64
CTSD-205ENST00000438213 SGPL1O95470 568 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms