RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ERC2O15083 957 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SEPT4O43236 478 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TDO2P48775 406 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 RRP1P56182 461 aaKnown RBP11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SYNPO2Q9UMS6 1093 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PLIN4Q96Q06 1357 aa11.24□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PATL2C9JE40 543 aaKnown RBP11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 F5H6K3 240 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MAP3K7O43318 606 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NDUFB10O96000 172 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MX1P20591 662 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 COPB2P35606 906 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 STAT3P40763 770 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 KLRC3Q07444 240 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 IFNL3Q8IZI9 196 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SEC62Q99442 399 aaKnown RBP11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MMP19Q99542 508 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SENP6Q9GZR1 1112 aaPredicted RBP11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 DIS3Q9Y2L1 958 aaKnown RBP11.23□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FOXP2O15409 715 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PRDM1O75626 825 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 KCTD2Q14681 263 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 LRIT3Q3SXY7 679 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TDHQ8IZJ6 230 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 STK11IPQ8N1F8 1099 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ARRDC4Q8NCT1 418 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GMCL1P1Q8NEA9 526 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MKL1Q969V6 931 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 CEP95Q96GE4 821 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FSD1Q9BTV5 496 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TEX13BQ9BXU2 312 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZNF287Q9HBT7 754 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 MYH4Q9Y623 1939 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 RAD21O60216 631 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 APPP05067 770 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PGK2P07205 417 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 SNX17Q15036 470 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 FAM47AQ5JRC9 791 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PRAMEF19Q5SWL8 479 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 GJC2Q5T442 439 aaPredicted RBP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ANO1Q5XXA6 986 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 ZNF444Q8N0Y2 327 aaPredicted RBP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 PRPF38AQ8NAV1 312 aaKnown RBP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 TINF2Q9BSI4 451 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 NACAP1Q9BZK3 213 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 UBE2OQ9C0C9 1292 aaKnown RBP11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 CLIP2Q9UDT6 1046 aa11.21□□□□□ -0.61
CDC42-IT1-201ENST00000431803 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 KBTBD13C9JR72 458 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 BHMG1C9JSJ3 638 aaPredicted RBP11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TTLL1O95922 423 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RTP1P59025 263 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PDE4BQ07343 736 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 PPARAQ07869 468 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 LRRC41Q15345 812 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 LRRC47Q8N1G4 583 aaKnown RBP11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 MSL3Q8N5Y2 521 aaKnown RBP11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 NEDD1Q8NHV4 660 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 NAPBQ9H115 298 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SLC38A10Q9HBR0 1119 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RIPK3Q9Y572 518 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
CDC42-IT1-201ENST00000431803 UNC80Q8N2C7 3258 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ZNF865P0CJ78 1059 aaPredicted RBP11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TSPY3P0CV98 308 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TSPY8P0CW00 308 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 TAL1P17542 331 aaPredicted RBP11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 OAZ1P54368 228 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SLC39A5Q6ZMH5 540 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 CRBNQ96SW2 442 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.19□□□□□ -0.62
CDC42-IT1-201ENST00000431803 EYSQ5T1H1 3165 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SMCHD1A6NHR9 2005 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ZBED4O75132 1171 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 RARBP10826 455 aa11.18□□□□□ -0.62
CDC42-IT1-201ENST00000431803 ADCYAP1R1P41586 468 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms