RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 KRT79Q5XKE5 535 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 OTUD5Q96G74 571 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 YEATS4O95619 227 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 MTMR2Q13614 643 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 NTRK3Q16288 839 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 MAGEC2Q9UBF1 373 aaPredicted RBP12.44□□□□□ -0.42
HIPK2-203ENST00000428878 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 ELP1O95163 1332 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 TPH2Q8IWU9 490 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 HPS3Q969F9 1004 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 CTNND2Q9UQB3 1225 aa12.44□□□□□ -0.42
HIPK2-203ENST00000428878 ADAMTS3O15072 1205 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 CUTAO60888 179 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 NF2P35240 595 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 STAT3P40763 770 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 DNA2P51530 1060 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 KRT26Q7Z3Y9 468 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 NEK8Q86SG6 692 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
HIPK2-203ENST00000428878 VPS16Q9H269 839 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 PRR29P0C7W0 189 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 STAT2P52630 851 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 UBASH3AP57075 661 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 PPP4CP60510 307 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 POSTNQ15063 836 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 LRRC41Q15345 812 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
HIPK2-203ENST00000428878 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
HIPK2-203ENST00000428878 IQUBQ8NA54 791 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 GOPCQ9HD26 462 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 CYTH3O43739 400 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 TPM3P06753 285 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 SHMT1P34896 483 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
HIPK2-203ENST00000428878 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 TBC1D5Q92609 795 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 RAB34Q9BZG1 259 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 TMOD4Q9NZQ9 345 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 GINS2Q9Y248 185 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 CSADQ9Y600 493 aa12.43□□□□□ -0.42
HIPK2-203ENST00000428878 WNT7AO00755 349 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 CTAGE5O15320 804 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 MATR3P43243 847 aaKnown RBP eCLIP12.42□□□□□ -0.425e-6■□□□□ 8.6
HIPK2-203ENST00000428878 LRMPQ12912 555 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
HIPK2-203ENST00000428878 SBK1Q52WX2 424 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 SHC4Q6S5L8 630 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 TMEM179Q6ZVK1 233 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 CABP7Q86V35 215 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 KIAA1468Q9P260 1216 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 MAD2L2Q9UI95 211 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 SLC16A10Q8TF71 515 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 BACH1O14867 736 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 ZNF445P59923 1031 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 STIM1Q13586 685 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 SYDE2Q5VT97 1194 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 NCAPG2Q86XI2 1143 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 CERS3Q8IU89 383 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 TMEM60Q9H2L4 133 aa12.42□□□□□ -0.42
HIPK2-203ENST00000428878 DDX25Q9UHL0 483 aaKnown RBP12.42□□□□□ -0.42
HIPK2-203ENST00000428878 NUP98P52948 1817 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 SFI1A8K8P3 1242 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 PDE4DQ08499 809 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 GRM4Q14833 912 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 FOXP1Q9H334 677 aaPredicted RBP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 SLC39A2Q9NP94 309 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 PCDHA12Q9UN75 941 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 N4BP3O15049 544 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 ARID5AQ03989 594 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 KRT25Q7Z3Z0 450 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 ZDHHC15Q96MV8 337 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 POLR3EQ9NVU0 708 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 NFE2L3Q9Y4A8 694 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 TPM2P07951 284 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 TPM1P09493 284 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 ATP1A3P13637 1013 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
HIPK2-203ENST00000428878 RDH13Q8NBN7 331 aa12.41□□□□□ -0.42
HIPK2-203ENST00000428878 ELP3Q9H9T3 547 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms