RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 XPNPEP3Q9NQH7 507 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 ZMYM6O95789 1325 aa19.14■□□□□ 0.65
DDR1-234ENST00000424544 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 PGK1P00558 417 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 NUCB1Q02818 461 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 FAM133AQ8N9E0 248 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 TSEN34Q9BSV6 310 aaKnown RBP19.13■□□□□ 0.65
DDR1-234ENST00000424544 STX8Q9UNK0 236 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 CNPY2Q9Y2B0 182 aa19.13■□□□□ 0.65
DDR1-234ENST00000424544 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
DDR1-234ENST00000424544 NMIQ13287 307 aaPredicted RBP19.12■□□□□ 0.65
DDR1-234ENST00000424544 BTNL9Q6UXG8 535 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 KCTD1Q719H9 257 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 RNF180Q86T96 592 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 ANKRD35Q8N283 1001 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 FERMT2Q96AC1 680 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 AGBL1Q96MI9 1066 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 ABHD16BQ9H3Z7 469 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 FAM184BQ9ULE4 1060 aa19.12■□□□□ 0.65
DDR1-234ENST00000424544 DUSP11O75319 330 aaKnown RBP19.11■□□□□ 0.65
DDR1-234ENST00000424544 SDSP20132 328 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 NKX3-2P78367 333 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 ACVR2BQ13705 512 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 TKFCQ3LXA3 575 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 TRIM60Q495X7 471 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.11■□□□□ 0.65
DDR1-234ENST00000424544 PRR12Q9ULL5 1215 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 ATP11BQ9Y2G3 1177 aa19.11■□□□□ 0.65
DDR1-234ENST00000424544 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
DDR1-234ENST00000424544 ADCY6O43306 1168 aa19.1■□□□□ 0.65
DDR1-234ENST00000424544 SLC4A3P48751 1232 aa19.1■□□□□ 0.65
DDR1-234ENST00000424544 CNTN2Q02246 1040 aa19.1■□□□□ 0.65
DDR1-234ENST00000424544 RASGRP2Q7LDG7 609 aa19.1■□□□□ 0.65
DDR1-234ENST00000424544 LENG1Q96BZ8 264 aaPredicted RBP19.1■□□□□ 0.65
DDR1-234ENST00000424544 A1CFQ9NQ94 594 aaKnown RBP19.1■□□□□ 0.65
DDR1-234ENST00000424544 PDLIM7Q9NR12 457 aa19.1■□□□□ 0.65
DDR1-234ENST00000424544 CCDC171Q6TFL3 1326 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 A0A1W2PQ45 241 aaPredicted RBP19.09■□□□□ 0.65
DDR1-234ENST00000424544 A0A1W2PQY0 241 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 TRIM43BA6NCK2 446 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 SOWAHBA6NEL2 793 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 PCP11498 1178 aaKnown RBP19.09■□□□□ 0.65
DDR1-234ENST00000424544 CST5P28325 142 aaPredicted RBP19.09■□□□□ 0.65
DDR1-234ENST00000424544 TLE2Q04725 743 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 ARMCX2Q7L311 632 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 SH3RF1Q7Z6J0 888 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 DCAF4Q8WV16 495 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 TRIM43Q96BQ3 446 aaPredicted RBP19.09■□□□□ 0.65
DDR1-234ENST00000424544 TTC14Q96N46 770 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 LBHD1Q9BQE6 289 aaPredicted RBP19.09■□□□□ 0.65
DDR1-234ENST00000424544 TMEM47Q9BQJ4 181 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 ACAD9Q9H845 621 aa19.09■□□□□ 0.65
DDR1-234ENST00000424544 SYNRGQ9UMZ2 1314 aa19.08■□□□□ 0.65
DDR1-234ENST00000424544 TRIM6-TRIM34B2RNG4 842 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 POTEB2H3BUK9 544 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 CTAGE5O15320 804 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
DDR1-234ENST00000424544 TOP1P11387 765 aaKnown RBP19.08■□□□□ 0.64
DDR1-234ENST00000424544 ITGB8P26012 769 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 CCDC144BQ3MJ40 725 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 TTBK2Q6IQ55 1244 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 ANKRD33Q7Z3H0 272 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 TOX2Q96NM4 488 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 TRERF1Q96PN7 1200 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 UPF3AQ9H1J1 476 aaKnown RBP19.08■□□□□ 0.64
DDR1-234ENST00000424544 RANBP17Q9H2T7 1088 aaKnown RBP19.08■□□□□ 0.64
DDR1-234ENST00000424544 RNF146Q9NTX7 359 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 A0A0C4DFX4 3053 aa19.08■□□□□ 0.64
DDR1-234ENST00000424544 ASTN1O14525 1302 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 MCM3APO60318 1980 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 MOXD2PA6NHM9 499 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 SNHG28P0DPA3 235 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 ACLYP53396 1101 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 GJA9P57773 515 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 IRX5P78411 483 aaPredicted RBP19.07■□□□□ 0.64
DDR1-234ENST00000424544 AKNAD1Q5T1N1 836 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 HOMER2Q9NSB8 354 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 PRKAG2Q9UGJ0 569 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
DDR1-234ENST00000424544 LTBP2Q14767 1821 aa19.07■□□□□ 0.64
DDR1-234ENST00000424544 MYADML2A6NDP7 307 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 KIAA0355O15063 1070 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 ICAM1P05362 532 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 CDK7P50613 346 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 SNAP25P60880 206 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 KCNA10Q16322 511 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 MUM1L1Q5H9M0 696 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 RILPL2Q969X0 211 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
DDR1-234ENST00000424544 ELP1O95163 1332 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 PDHBP11177 359 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 ALAS1P13196 640 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 HAND2P61296 217 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 FAAP100Q0VG06 881 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 FAM109BQ6ICB4 259 aaPredicted RBP19.05■□□□□ 0.64
DDR1-234ENST00000424544 MFSD6Q6ZSS7 791 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 TBC1D10CQ8IV04 446 aa19.05■□□□□ 0.64
DDR1-234ENST00000424544 DEFB123Q8N688 67 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms