RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 CENPFP49454 3210 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 SMCHD1A6NHR9 2005 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 SH2B2O14492 632 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-203ENST00000424393 COBLO75128 1261 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 HMGCRP04035 888 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-203ENST00000424393 ASPRV1Q53RT3 343 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 NEK1Q96PY6 1258 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 MMP19Q99542 508 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 UBA5Q9GZZ9 404 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 FLRT1Q9NZU1 646 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 BIN2Q9UBW5 565 aaPredicted RBP12.78□□□□□ -0.36
TOP3B-203ENST00000424393 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
TOP3B-203ENST00000424393 HTTP42858 3142 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
TOP3B-203ENST00000424393 IGHA2P01877 340 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 PARP1P09874 1014 aaKnown RBP12.77□□□□□ -0.37
TOP3B-203ENST00000424393 FCER1AP12319 257 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 ZKSCAN1P17029 563 aaPredicted RBP12.77□□□□□ -0.37
TOP3B-203ENST00000424393 UBXN2AP68543 259 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 EXOSC10Q01780 885 aaKnown RBP12.77□□□□□ -0.37
TOP3B-203ENST00000424393 TROAPQ12815 778 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 KRT32Q14532 448 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 GRM4Q14833 912 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3B-203ENST00000424393 CHST13Q8NET6 341 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 DPF3Q92784 378 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 TMEM87BQ96K49 555 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 USP26Q9BXU7 913 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 LRRC2Q9BYS8 371 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
TOP3B-203ENST00000424393 CEP290O15078 2479 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
TOP3B-203ENST00000424393 ICAM1P05362 532 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 PGK2P07205 417 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 ALAS1P13196 640 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 CCL5P13501 91 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 KCTD2Q14681 263 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 MAP3K21Q5TCX8 1036 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 DPP9Q86TI2 863 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 TRMT44Q8IYL2 757 aaKnown RBP12.76□□□□□ -0.37
TOP3B-203ENST00000424393 ADGRF4Q8IZF3 695 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 TCEANC2Q96MN5 208 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 MYL10Q9BUA6 226 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 FBXO40Q9UH90 709 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 CCPG1Q9ULG6 757 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 LCTP09848 1927 aa12.76□□□□□ -0.37
TOP3B-203ENST00000424393 DNAJC25-GNG10A0A024R161 153 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 KLRF2D3W0D1 207 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 MYH6P13533 1939 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 CPA1P15085 419 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 LIFRP42702 1097 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
TOP3B-203ENST00000424393 ZNF792Q3KQV3 632 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 MUM1L1Q5H9M0 696 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 DHX32Q7L7V1 743 aaKnown RBP12.75□□□□□ -0.37
TOP3B-203ENST00000424393 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 JAKMIP1Q96N16 626 aaKnown RBP12.75□□□□□ -0.37
TOP3B-203ENST00000424393 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
TOP3B-203ENST00000424393 CCDC69A6NI79 296 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 H0YGN5 161 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 DDAH1O94760 285 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
TOP3B-203ENST00000424393 CDC37Q16543 378 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-203ENST00000424393 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 NFXL1Q6ZNB6 911 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 TMTC2Q8N394 836 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 NUP133Q8WUM0 1156 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 MAML3Q96JK9 1138 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.74□□□□□ -0.37
TOP3B-203ENST00000424393 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
TOP3B-203ENST00000424393 PAK6Q9NQU5 681 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-203ENST00000424393 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 TRIOBPQ9H2D6 2365 aa12.74□□□□□ -0.37
TOP3B-203ENST00000424393 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 GJB1P08034 283 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 HMGB1P09429 215 aaKnown RBP12.73□□□□□ -0.37
TOP3B-203ENST00000424393 RXRAP19793 462 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 CCND3P30281 292 aaPredicted RBP12.73□□□□□ -0.37
TOP3B-203ENST00000424393 CYP2C19P33261 490 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 RAB11FIP4Q86YS3 637 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
TOP3B-203ENST00000424393 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 325.3 ms