RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SNAP25P60880 206 aa30.95■■■□□ 2.55
CDK9-202ENST00000421939 GPATCH4Q5T3I0 446 aaKnown RBP30.95■■■□□ 2.55
CDK9-202ENST00000421939 IFIT1BQ5T764 474 aaKnown RBP30.95■■■□□ 2.55
CDK9-202ENST00000421939 CCDC174Q6PII3 467 aa30.95■■■□□ 2.55
CDK9-202ENST00000421939 MAML3Q96JK9 1138 aa30.95■■■□□ 2.55
CDK9-202ENST00000421939 AGBL1Q96MI9 1066 aa30.95■■■□□ 2.55
CDK9-202ENST00000421939 RANBP17Q9H2T7 1088 aaKnown RBP30.95■■■□□ 2.55
CDK9-202ENST00000421939 TFRCP02786 760 aaKnown RBP30.94■■■□□ 2.54
CDK9-202ENST00000421939 CCND3P30281 292 aaPredicted RBP30.94■■■□□ 2.54
CDK9-202ENST00000421939 SEC23AQ15436 765 aa30.94■■■□□ 2.54
CDK9-202ENST00000421939 HOMER2Q9NSB8 354 aa30.94■■■□□ 2.54
CDK9-202ENST00000421939 PLXNA1Q9UIW2 1896 aa30.93■■■□□ 2.54
CDK9-202ENST00000421939 ZNF792Q3KQV3 632 aa30.93■■■□□ 2.54
CDK9-202ENST00000421939 TKFCQ3LXA3 575 aa30.93■■■□□ 2.54
CDK9-202ENST00000421939 RNF146Q9NTX7 359 aa30.93■■■□□ 2.54
CDK9-202ENST00000421939 DIS3Q9Y2L1 958 aaKnown RBP30.93■■■□□ 2.54
CDK9-202ENST00000421939 FARP2O94887 1054 aaPredicted RBP30.92■■■□□ 2.54
CDK9-202ENST00000421939 DDX11Q96FC9 970 aa30.92■■■□□ 2.54
CDK9-202ENST00000421939 ACAD9Q9H845 621 aa30.92■■■□□ 2.54
CDK9-202ENST00000421939 SLC27A2O14975 620 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 ICAM1P05362 532 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 GOLGA8HP0CJ92 632 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 UBE2Q1Q7Z7E8 422 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 ANKRD35Q8N283 1001 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 CCPG1Q9ULG6 757 aa30.91■■■□□ 2.54
CDK9-202ENST00000421939 DNAJC25-GNG10A0A024R161 153 aa30.9■■■□□ 2.54
CDK9-202ENST00000421939 ALAS1P13196 640 aa30.9■■■□□ 2.54
CDK9-202ENST00000421939 CYBAP13498 195 aa30.9■■■□□ 2.54
CDK9-202ENST00000421939 ASPRV1Q53RT3 343 aa30.9■■■□□ 2.54
CDK9-202ENST00000421939 CREB3L3Q68CJ9 461 aa30.9■■■□□ 2.54
CDK9-202ENST00000421939 MB21D2Q8IYB1 491 aaPredicted RBP30.9■■■□□ 2.54
CDK9-202ENST00000421939 IFIT3O14879 490 aaKnown RBP30.89■■■□□ 2.54
CDK9-202ENST00000421939 SART3Q15020 963 aaKnown RBP30.89■■■□□ 2.54
CDK9-202ENST00000421939 NECTIN1Q15223 517 aa30.89■■■□□ 2.54
CDK9-202ENST00000421939 TRPV1Q8NER1 839 aa30.89■■■□□ 2.54
CDK9-202ENST00000421939 TRERF1Q96PN7 1200 aa30.89■■■□□ 2.54
CDK9-202ENST00000421939 OGDHLQ9ULD0 1010 aa30.89■■■□□ 2.54
CDK9-202ENST00000421939 ERICH2A1L162 156 aa30.88■■■□□ 2.53
CDK9-202ENST00000421939 PARP1P09874 1014 aaKnown RBP30.87■■■□□ 2.53
CDK9-202ENST00000421939 CNGA1P29973 690 aa30.87■■■□□ 2.53
CDK9-202ENST00000421939 ANTXR2P58335 489 aa30.87■■■□□ 2.53
CDK9-202ENST00000421939 CHST3Q7LGC8 479 aa30.87■■■□□ 2.53
CDK9-202ENST00000421939 ANKLE1Q8NAG6 615 aa30.87■■■□□ 2.53
CDK9-202ENST00000421939 TINF2Q9BSI4 451 aa30.87■■■□□ 2.53
CDK9-202ENST00000421939 TAL1P17542 331 aaPredicted RBP30.86■■■□□ 2.53
CDK9-202ENST00000421939 WTAPQ15007 396 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 LHX8Q68G74 356 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 UBA5Q9GZZ9 404 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 CPVLQ9H3G5 476 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 A1CFQ9NQ94 594 aaKnown RBP30.86■■■□□ 2.53
CDK9-202ENST00000421939 DDX20Q9UHI6 824 aaKnown RBP30.86■■■□□ 2.53
CDK9-202ENST00000421939 PNMA2Q9UL42 364 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 FRMPD3Q5JV73 1810 aa30.86■■■□□ 2.53
CDK9-202ENST00000421939 PFASO15067 1338 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 WDR19Q8NEZ3 1342 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 MSCO60682 206 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 TMEM67Q5HYA8 995 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 RNF20Q5VTR2 975 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 MSL3Q8N5Y2 521 aaKnown RBP30.85■■■□□ 2.53
CDK9-202ENST00000421939 NRBP1Q9UHY1 535 aa30.85■■■□□ 2.53
CDK9-202ENST00000421939 MUM1L1Q5H9M0 696 aa30.84■■■□□ 2.53
CDK9-202ENST00000421939 ZNF467Q7Z7K2 595 aaPredicted RBP30.84■■■□□ 2.53
CDK9-202ENST00000421939 SENP2Q9HC62 589 aa30.84■■■□□ 2.53
CDK9-202ENST00000421939 SYNGAP1Q96PV0 1343 aa30.83■■■□□ 2.53
CDK9-202ENST00000421939 FGD4Q96M96 766 aa30.83■■■□□ 2.53
CDK9-202ENST00000421939 POTEB2H3BUK9 544 aa30.82■■■□□ 2.52
CDK9-202ENST00000421939 SEPT4O43236 478 aa30.82■■■□□ 2.52
CDK9-202ENST00000421939 PRAMEF19Q5SWL8 479 aa30.82■■■□□ 2.52
CDK9-202ENST00000421939 IGDCC4Q8TDY8 1250 aa30.82■■■□□ 2.52
CDK9-202ENST00000421939 DIS3LQ8TF46 1054 aaKnown RBP30.82■■■□□ 2.52
CDK9-202ENST00000421939 MTA3Q9BTC8 594 aa30.82■■■□□ 2.52
CDK9-202ENST00000421939 SMCHD1A6NHR9 2005 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 PRC1O43663 620 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 MCM5P33992 734 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 CDC37Q16543 378 aaPredicted RBP30.81■■■□□ 2.52
CDK9-202ENST00000421939 MAMDC4Q6UXC1 1216 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 ADGRF4Q8IZF3 695 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 FAM133AQ8N9E0 248 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 PAWRQ96IZ0 340 aaKnown RBP30.81■■■□□ 2.52
CDK9-202ENST00000421939 CNPY2Q9Y2B0 182 aa30.81■■■□□ 2.52
CDK9-202ENST00000421939 MNX1P50219 401 aaPredicted RBP30.8■■■□□ 2.52
CDK9-202ENST00000421939 CNTN2Q02246 1040 aa30.8■■■□□ 2.52
CDK9-202ENST00000421939 NSMFQ6X4W1 530 aa30.8■■■□□ 2.52
CDK9-202ENST00000421939 NECAB2Q7Z6G3 386 aa30.8■■■□□ 2.52
CDK9-202ENST00000421939 STAG2Q8N3U4 1231 aa30.8■■■□□ 2.52
CDK9-202ENST00000421939 CYP39A1Q9NYL5 469 aa30.8■■■□□ 2.52
CDK9-202ENST00000421939 NFIBO00712 420 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 DHX16O60231 1041 aaKnown RBP30.79■■■□□ 2.52
CDK9-202ENST00000421939 GRM4Q14833 912 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 CATIPQ7Z7H3 387 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 HTATIP2Q9BUP3 242 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 LY9Q9HBG7 655 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 MAD2L2Q9UI95 211 aa30.79■■■□□ 2.52
CDK9-202ENST00000421939 PALM3A6NDB9 673 aaPredicted RBP30.78■■■□□ 2.52
CDK9-202ENST00000421939 TROAPQ12815 778 aa30.78■■■□□ 2.52
CDK9-202ENST00000421939 COL9A3Q14050 684 aaPredicted RBP30.78■■■□□ 2.52
CDK9-202ENST00000421939 TMEM87BQ96K49 555 aa30.78■■■□□ 2.52
CDK9-202ENST00000421939 GPHNQ9NQX3 736 aaPredicted RBP30.78■■■□□ 2.52
CDK9-202ENST00000421939 KLRF2D3W0D1 207 aa30.77■■■□□ 2.52
CDK9-202ENST00000421939 SH2B2O14492 632 aaPredicted RBP30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms