RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ATP2A1O14983 1001 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 SLC25A27O95847 323 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 FDX1P10109 184 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 RXRAP19793 462 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 PTPREP23469 700 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 LIFRP42702 1097 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 OAZ1P54368 228 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 MORN1Q5T089 497 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 AGBL1Q96MI9 1066 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 MROH8Q9H579 483 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 GJD2Q9UKL4 321 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
SKA1-203ENST00000417656 PLXNA1Q9UIW2 1896 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
SKA1-203ENST00000417656 DHX16O60231 1041 aaKnown RBP14.55□□□□□ -0.08
SKA1-203ENST00000417656 EIF5BO60841 1220 aaKnown RBP14.55□□□□□ -0.08
SKA1-203ENST00000417656 CYP2B6P20813 491 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 PSMA5P28066 241 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 COPB2P35606 906 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 GRB14Q14449 540 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 Q6ZUG5 572 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 SGMS1Q86VZ5 419 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 MICU3Q86XE3 530 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 SH3TC2Q8TF17 1288 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
SKA1-203ENST00000417656 HOMER2Q9NSB8 354 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
SKA1-203ENST00000417656 SLC15A5A6NIM6 579 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 KLRF2D3W0D1 207 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 ELNP15502 786 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 ADORA2AP29274 412 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 RGS2P41220 211 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 FGD1P98174 961 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 IRF5Q13568 498 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
SKA1-203ENST00000417656 SLC35G1Q2M3R5 365 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 SLC9C1Q4G0N8 1177 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 APOA5Q6Q788 366 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 CCDC144CPQ8IYA2 1237 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 ADGRF4Q8IZF3 695 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 TMTC2Q8N394 836 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
SKA1-203ENST00000417656 USP6NLQ92738 828 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 MMP19Q99542 508 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 APBA2Q99767 749 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 SLC12A7Q9Y666 1083 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 SMCHD1A6NHR9 2005 aa14.54□□□□□ -0.08
SKA1-203ENST00000417656 LCTP09848 1927 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SKA1-203ENST00000417656 KLF18A0A0U1RQI7 1052 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 ADCY3O60266 1144 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 ICAM1P05362 532 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 ALAS1P13196 640 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 GRK4P32298 578 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 MAP2K5Q13163 448 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 RUFY3Q7L099 469 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 SLAIN1Q8ND83 568 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 BRF1Q92994 677 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 TM6SF1Q9BZW5 370 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 JMJD4Q9H9V9 463 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 CYP46A1Q9Y6A2 500 aa14.53□□□□□ -0.08
SKA1-203ENST00000417656 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 CALM1P0DP23 149 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 CALM2P0DP24 149 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 CALM3P0DP25 149 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 FCER1AP12319 257 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 KIF5BP33176 963 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 ANAPC15P60006 121 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 APOBRQ0VD83 1088 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 KCTD2Q14681 263 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 CCL14Q16627 93 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 QRICH1Q2TAL8 776 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 MUM1L1Q5H9M0 696 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 NBPF11Q86T75 865 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 CHST13Q8NET6 341 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 NPLOC4Q8TAT6 608 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 TRIB2Q92519 343 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 ARMC5Q96C12 935 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 MAP3K14Q99558 947 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 ACAD9Q9H845 621 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 VAT1LQ9HCJ6 419 aa14.52□□□□□ -0.09
SKA1-203ENST00000417656 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
SKA1-203ENST00000417656 GOLGA8AA7E2F4 631 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 GOLGA8BA8MQT2 603 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 ZBTB43O43298 467 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 CYTH3O43739 400 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 STRNO43815 780 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 COBLO75128 1261 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
SKA1-203ENST00000417656 INHAP05111 366 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 PGK2P07205 417 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 TKFCQ3LXA3 575 aa14.51□□□□□ -0.09
SKA1-203ENST00000417656 USH1GQ495M9 461 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms