RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 COL9A1P20849 921 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 LRRFIP1Q32MZ4 808 aaKnown RBP8.32□□□□□ -1.08
COPS3-202ENST00000417352 PROX2Q3B8N5 592 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 OLFML2BQ68BL8 750 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 SNRNP48Q6IEG0 339 aaKnown RBP8.32□□□□□ -1.08
COPS3-202ENST00000417352 TYW1BQ6NUM6 668 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 NOL8Q76FK4 1167 aaKnown RBP8.32□□□□□ -1.08
COPS3-202ENST00000417352 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 MAML3Q96JK9 1138 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 STRBPQ96SI9 672 aaKnown RBP8.32□□□□□ -1.08
COPS3-202ENST00000417352 SLF1Q9BQI6 1058 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 FSD1Q9BTV5 496 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 NACAP1Q9BZK3 213 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 XPNPEP3Q9NQH7 507 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 HOMER2Q9NSB8 354 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 CNPY2Q9Y2B0 182 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 GSG1L2A8MUP6 293 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 F5H6K3 240 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 M0R2C6 588 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 ERC2O15083 957 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 GPAA1O43292 621 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 PQBP1O60828 265 aaKnown RBP8.31□□□□□ -1.08
COPS3-202ENST00000417352 TSPY3P0CV98 308 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 TSPY8P0CW00 308 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 KLRC3Q07444 240 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 TRIM60Q495X7 471 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 SLC39A5Q6ZMH5 540 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 RNF180Q86T96 592 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 ANKRD35Q8N283 1001 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 TINF2Q9BSI4 451 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
COPS3-202ENST00000417352 PPP1R9AQ9ULJ8 1098 aa8.31□□□□□ -1.08
COPS3-202ENST00000417352 SMCHD1A6NHR9 2005 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 RANBP2P49792 3224 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 PATL2C9JE40 543 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 ZFYP08048 801 aaPredicted RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 TAL1P17542 331 aaPredicted RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 GNAT2P19087 354 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 RASA1P20936 1047 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 PDE4BQ07343 736 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 LRRC41Q15345 812 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 LRIT3Q3SXY7 679 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 RIOX2Q8IUF8 465 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 ABRAQ8N0Z2 381 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 LRRC47Q8N1G4 583 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 PRPF38AQ8NAV1 312 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 APPBP2Q92624 585 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 BADQ92934 168 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 LENG1Q96BZ8 264 aaPredicted RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 NAPBQ9H115 298 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 RAVER2Q9HCJ3 691 aaKnown RBP8.3□□□□□ -1.08
COPS3-202ENST00000417352 MYH4Q9Y623 1939 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 PLXNA1Q9UIW2 1896 aa8.3□□□□□ -1.08
COPS3-202ENST00000417352 SZT2Q5T011 3432 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 DNAH12Q6ZR08 3092 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 RLFQ13129 1914 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 TTLL1O95922 423 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 NDUFB10O96000 172 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 RAG1P15918 1043 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 COPB2P35606 906 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 TFAP4Q01664 338 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 SBK1Q52WX2 424 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 IFNL3Q8IZI9 196 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 CEP95Q96GE4 821 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
COPS3-202ENST00000417352 TEX13BQ9BXU2 312 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 NYAP2Q9P242 653 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
COPS3-202ENST00000417352 TSPY2A6NKD2 308 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 DCDC2CA8MYV0 355 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 TMEM232C9JQI7 657 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 RANBP6O60518 1105 aaKnown RBP8.28□□□□□ -1.08
COPS3-202ENST00000417352 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
COPS3-202ENST00000417352 AKR1A1P14550 325 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 MCCP23508 829 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 SNAP25P60880 206 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 TLE2Q04725 743 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 SHHQ15465 462 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 ZNF792Q3KQV3 632 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 RRP12Q5JTH9 1297 aaKnown RBP8.28□□□□□ -1.08
COPS3-202ENST00000417352 ZNF697Q5TEC3 545 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 GIMAP6Q6P9H5 292 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 CCDC174Q6PII3 467 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 OTUD7AQ8TE49 926 aaPredicted RBP8.28□□□□□ -1.08
COPS3-202ENST00000417352 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
COPS3-202ENST00000417352 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.28□□□□□ -1.08
COPS3-202ENST00000417352 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms