RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CCDC174Q6PII3 467 aa26.91■■□□□ 1.9
SMARCB1-205ENST00000417137 MAD2L2Q9UI95 211 aa26.91■■□□□ 1.9
SMARCB1-205ENST00000417137 A0A0G2JMZ2 1700 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 DHX16O60231 1041 aaKnown RBP26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 ADCY3O60266 1144 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 MAP2K5Q13163 448 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 SLAIN1Q8ND83 568 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 CHST13Q8NET6 341 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 PXYLP1Q8TE99 480 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 TCEANC2Q96MN5 208 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 ZSWIM6Q9HCJ5 1215 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 SLC5A4Q9NY91 659 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 CYP46A1Q9Y6A2 500 aa26.9■■□□□ 1.9
SMARCB1-205ENST00000417137 PARP14Q460N5 1801 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 SEC24BO95487 1268 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 ICAM1P05362 532 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 XRCC5P13010 732 aaKnown RBP26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 GRK4P32298 578 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 GNAQP50148 359 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 SNAP25P60880 206 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 GRB14Q14449 540 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 KCTD2Q14681 263 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 RUFY3Q7L099 469 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 TRMT44Q8IYL2 757 aaKnown RBP26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 ADGRF4Q8IZF3 695 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 STAG2Q8N3U4 1231 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 AGBL1Q96MI9 1066 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 MMP19Q99542 508 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 CCPG1Q9ULG6 757 aa26.89■■□□□ 1.9
SMARCB1-205ENST00000417137 ZNF536O15090 1300 aa26.89■■□□□ 1.89
SMARCB1-205ENST00000417137 CPA1P15085 419 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 CYP2B6P20813 491 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 Q6ZUG5 572 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 DPP9Q86TI2 863 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 FBXL16Q8N461 479 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 USP6NLQ92738 828 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 LZTS2Q9BRK4 669 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 VAT1LQ9HCJ6 419 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 RIPK3Q9Y572 518 aa26.88■■□□□ 1.89
SMARCB1-205ENST00000417137 MGAMO43451 1857 aa26.87■■□□□ 1.89
SMARCB1-205ENST00000417137 ADORA2AP29274 412 aa26.87■■□□□ 1.89
SMARCB1-205ENST00000417137 MYL10Q9BUA6 226 aa26.87■■□□□ 1.89
SMARCB1-205ENST00000417137 BIN2Q9UBW5 565 aaPredicted RBP26.87■■□□□ 1.89
SMARCB1-205ENST00000417137 ZSWIM8A7E2V4 1837 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 ALAS1P13196 640 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 TRERF1Q96PN7 1200 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 APBA2Q99767 749 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 CPVLQ9H3G5 476 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 ACAD9Q9H845 621 aa26.86■■□□□ 1.89
SMARCB1-205ENST00000417137 HOXC6P09630 235 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 SMARCA1P28370 1054 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 CDC37Q16543 378 aaPredicted RBP26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 APOA5Q6Q788 366 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 FANCBQ8NB91 859 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 ARMC5Q96C12 935 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 DDX11Q96FC9 970 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 JMJD4Q9H9V9 463 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 HOMER2Q9NSB8 354 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 RNF146Q9NTX7 359 aa26.85■■□□□ 1.89
SMARCB1-205ENST00000417137 ZBTB43O43298 467 aa26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 RCAN1P53805 252 aa26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 UBXN2AP68543 259 aa26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 ANKRD35Q8N283 1001 aa26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 BRF1Q92994 677 aa26.84■■□□□ 1.89
SMARCB1-205ENST00000417137 KLF18A0A0U1RQI7 1052 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 TRAF1Q13077 416 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 MICU3Q86XE3 530 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 SH3TC2Q8TF17 1288 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 RIOX1Q9H6W3 641 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 PDRG1Q9NUG6 133 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 RBM28Q9NW13 759 aaKnown RBP26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 BRPF3Q9ULD4 1205 aa26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 NAP1L2Q9ULW6 460 aaPredicted RBP26.83■■□□□ 1.89
SMARCB1-205ENST00000417137 COL11A1P12107 1806 aaPredicted RBP26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 ELNP15502 786 aa26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 PPP2R5BQ15173 497 aa26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 IL17RAQ96F46 866 aa26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 AGXT2Q9BYV1 514 aa26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 UPF3BQ9BZI7 483 aaKnown RBP26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 UPF2Q9HAU5 1272 aaKnown RBP26.82■■□□□ 1.88
SMARCB1-205ENST00000417137 ZBTB5O15062 677 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 HMGCRP04035 888 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 RXRAP19793 462 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 APOBRQ0VD83 1088 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 QRICH1Q2TAL8 776 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 FBXO11Q86XK2 927 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 CCDC144CPQ8IYA2 1237 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 MTMR8Q96EF0 704 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 SPZ1Q9BXG8 430 aa26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 DIS3Q9Y2L1 958 aaKnown RBP26.81■■□□□ 1.88
SMARCB1-205ENST00000417137 COBLO75128 1261 aa26.8■■□□□ 1.88
SMARCB1-205ENST00000417137 RAB11FIP4Q86YS3 637 aa26.8■■□□□ 1.88
SMARCB1-205ENST00000417137 ZNF333Q96JL9 665 aa26.8■■□□□ 1.88
SMARCB1-205ENST00000417137 AMNQ9BXJ7 453 aa26.8■■□□□ 1.88
SMARCB1-205ENST00000417137 CCDC196A0A1B0GTZ2 297 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 RTN1Q16799 776 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 MFSD14CQ5VZR4 134 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 NPLOC4Q8TAT6 608 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 RRP36Q96EU6 259 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms