RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ICAM1P05362 532 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 HSPA4P34932 840 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 MTFR1Q15390 333 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 CCDC174Q6PII3 467 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 CATIPQ7Z7H3 387 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 RASEFQ8IZ41 740 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 TMTC2Q8N394 836 aa21.03■□□□□ 0.96
SEMA3B-201ENST00000416295 SNAP25P60880 206 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 CCL14Q16627 93 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 MFSD14CQ5VZR4 134 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 NPLOC4Q8TAT6 608 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 AGBL1Q96MI9 1066 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 RNF208Q9H0X6 261 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 ACAD9Q9H845 621 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 LY9Q9HBG7 655 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 HOMER2Q9NSB8 354 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 CCPG1Q9ULG6 757 aa21.02■□□□□ 0.96
SEMA3B-201ENST00000416295 WDR19Q8NEZ3 1342 aa21.02■□□□□ 0.95
SEMA3B-201ENST00000416295 BRCA2P51587 3418 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 SH2B2O14492 632 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 COBLO75128 1261 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 HMGB1P09429 215 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 OLFML2BQ68BL8 750 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 KCNB2Q92953 911 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 UNC93B1Q9H1C4 597 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 SENP2Q9HC62 589 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 RNF146Q9NTX7 359 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 RPTORQ8N122 1335 aa21.01■□□□□ 0.95
SEMA3B-201ENST00000416295 MKI67P46013 3256 aaKnown RBP21■□□□□ 0.95
SEMA3B-201ENST00000416295 EIF5BO60841 1220 aaKnown RBP21■□□□□ 0.95
SEMA3B-201ENST00000416295 DDAH1O94760 285 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 SLC34A2O95436 690 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 GJB1P08034 283 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 ALAS1P13196 640 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 PRKAR2AP13861 404 aaKnown RBP21■□□□□ 0.95
SEMA3B-201ENST00000416295 LIFRP42702 1097 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 TROAPQ12815 778 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 GRM4Q14833 912 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 MAP3K21Q5TCX8 1036 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 NFXL1Q6ZNB6 911 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 ANKRD35Q8N283 1001 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 TRERF1Q96PN7 1200 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 UBA5Q9GZZ9 404 aa21■□□□□ 0.95
SEMA3B-201ENST00000416295 HMX1Q9NP08 348 aaPredicted RBP21■□□□□ 0.95
SEMA3B-201ENST00000416295 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
SEMA3B-201ENST00000416295 CCDC69A6NI79 296 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 DHX16O60231 1041 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 PGK2P07205 417 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 TRIM32Q13049 653 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 ADCK5Q3MIX3 580 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 DHX32Q7L7V1 743 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 ADGRF4Q8IZF3 695 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 ZNF654Q8IZM8 581 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 MAP3K14Q99558 947 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 FLRT1Q9NZU1 646 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 MAD2L2Q9UI95 211 aa20.99■□□□□ 0.95
SEMA3B-201ENST00000416295 DNAJC25-GNG10A0A024R161 153 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 PALM3A6NDB9 673 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 CAPN2P17655 700 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 CACNB2Q08289 660 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 COL9A3Q14050 684 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 CDC37Q16543 378 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 STAG2Q8N3U4 1231 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 CPVLQ9H3G5 476 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 PAK6Q9NQU5 681 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 PFASO15067 1338 aa20.98■□□□□ 0.95
SEMA3B-201ENST00000416295 IGHA2P01877 340 aa20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 KIF5BP33176 963 aa20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 GJA8P48165 433 aa20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 CTCFLQ8NI51 663 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 NUP133Q8WUM0 1156 aa20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 USP26Q9BXU7 913 aa20.97■□□□□ 0.95
SEMA3B-201ENST00000416295 CALM1P0DP23 149 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 CALM2P0DP24 149 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 CALM3P0DP25 149 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 PSMA5P28066 241 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 CYP2C19P33261 490 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 EXOSC10Q01780 885 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 SGMS1Q86VZ5 419 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 U2AF1L4Q8WU68 220 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 JAKMIP1Q96N16 626 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 LRRC2Q9BYS8 371 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 JMJD4Q9H9V9 463 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 A1CFQ9NQ94 594 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 SLC12A7Q9Y666 1083 aa20.96■□□□□ 0.95
SEMA3B-201ENST00000416295 MUM1L1Q5H9M0 696 aa20.95■□□□□ 0.94
SEMA3B-201ENST00000416295 BLOC1S2Q6QNY1 142 aa20.95■□□□□ 0.94
SEMA3B-201ENST00000416295 SYNE3Q6ZMZ3 975 aa20.95■□□□□ 0.94
SEMA3B-201ENST00000416295 ZNF467Q7Z7K2 595 aaPredicted RBP20.95■□□□□ 0.94
SEMA3B-201ENST00000416295 DEFB118Q96PH6 123 aa20.95■□□□□ 0.94
SEMA3B-201ENST00000416295 VAT1LQ9HCJ6 419 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms