RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 CCL14Q16627 93 aa29.55■■■□□ 2.32
CPNE1-207ENST00000414664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.55■■■□□ 2.323e-8■□□□□ 9.3
CPNE1-207ENST00000414664 DDX11Q96FC9 970 aa29.55■■■□□ 2.32
CPNE1-207ENST00000414664 NEK1Q96PY6 1258 aa29.55■■■□□ 2.32
CPNE1-207ENST00000414664 UNC93B1Q9H1C4 597 aa29.55■■■□□ 2.32
CPNE1-207ENST00000414664 HMX1Q9NP08 348 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-207ENST00000414664 RPTORQ8N122 1335 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 POTEFA5A3E0 1075 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 GJB1P08034 283 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 OLFML2BQ68BL8 750 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 CATIPQ7Z7H3 387 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 UBA5Q9GZZ9 404 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 ACAD9Q9H845 621 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 CCPG1Q9ULG6 757 aa29.54■■■□□ 2.32
CPNE1-207ENST00000414664 DIS3Q9Y2L1 958 aaKnown RBP29.54■■■□□ 2.32
CPNE1-207ENST00000414664 ALAS1P13196 640 aa29.53■■■□□ 2.32
CPNE1-207ENST00000414664 HSPA4P34932 840 aa29.53■■■□□ 2.32
CPNE1-207ENST00000414664 ANKRD35Q8N283 1001 aa29.53■■■□□ 2.32
CPNE1-207ENST00000414664 HOMER2Q9NSB8 354 aa29.53■■■□□ 2.32
CPNE1-207ENST00000414664 RNF146Q9NTX7 359 aa29.53■■■□□ 2.32
CPNE1-207ENST00000414664 RBBP6Q7Z6E9 1792 aaKnown RBP29.53■■■□□ 2.32
CPNE1-207ENST00000414664 ZNFX1Q9P2E3 1918 aaKnown RBP29.53■■■□□ 2.32
CPNE1-207ENST00000414664 HMGB1P09429 215 aaKnown RBP29.52■■■□□ 2.32
CPNE1-207ENST00000414664 PRKAR2AP13861 404 aaKnown RBP29.52■■■□□ 2.32
CPNE1-207ENST00000414664 CAPN2P17655 700 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 TRIM32Q13049 653 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 MAP3K21Q5TCX8 1036 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 RASEFQ8IZ41 740 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 KCNB2Q92953 911 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 TRERF1Q96PN7 1200 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 FLRT1Q9NZU1 646 aa29.52■■■□□ 2.32
CPNE1-207ENST00000414664 CENPFP49454 3210 aa29.51■■■□□ 2.32
CPNE1-207ENST00000414664 PGK2P07205 417 aa29.51■■■□□ 2.31
CPNE1-207ENST00000414664 NFXL1Q6ZNB6 911 aa29.51■■■□□ 2.31
CPNE1-207ENST00000414664 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.51■■■□□ 2.316e-9■□□□□ 10.4
CPNE1-207ENST00000414664 LY9Q9HBG7 655 aa29.51■■■□□ 2.31
CPNE1-207ENST00000414664 SENP2Q9HC62 589 aa29.51■■■□□ 2.31
CPNE1-207ENST00000414664 WDR19Q8NEZ3 1342 aa29.5■■■□□ 2.31
CPNE1-207ENST00000414664 SH2B2O14492 632 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-207ENST00000414664 DHX16O60231 1041 aaKnown RBP29.5■■■□□ 2.31
CPNE1-207ENST00000414664 LIFRP42702 1097 aa29.5■■■□□ 2.31
CPNE1-207ENST00000414664 CACNB2Q08289 660 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-207ENST00000414664 GRM4Q14833 912 aa29.5■■■□□ 2.31
CPNE1-207ENST00000414664 ZNF792Q3KQV3 632 aa29.5■■■□□ 2.31
CPNE1-207ENST00000414664 MAML3Q96JK9 1138 aa29.5■■■□□ 2.31
CPNE1-207ENST00000414664 PAK6Q9NQU5 681 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-207ENST00000414664 KIAA0100Q14667 2235 aaKnown RBP29.49■■■□□ 2.31
CPNE1-207ENST00000414664 PALM3A6NDB9 673 aaPredicted RBP29.49■■■□□ 2.31
CPNE1-207ENST00000414664 CCDC69A6NI79 296 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 KLRF2D3W0D1 207 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 EN2P19622 333 aaPredicted RBP29.49■■■□□ 2.31
CPNE1-207ENST00000414664 GJA8P48165 433 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 TROAPQ12815 778 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 DHX32Q7L7V1 743 aaKnown RBP29.49■■■□□ 2.31
CPNE1-207ENST00000414664 ADGRF4Q8IZF3 695 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 MAD2L2Q9UI95 211 aa29.49■■■□□ 2.31
CPNE1-207ENST00000414664 EIF5BO60841 1220 aaKnown RBP29.48■■■□□ 2.31
CPNE1-207ENST00000414664 DEFB118Q96PH6 123 aa29.48■■■□□ 2.31
CPNE1-207ENST00000414664 MAP3K14Q99558 947 aa29.48■■■□□ 2.31
CPNE1-207ENST00000414664 CPVLQ9H3G5 476 aa29.48■■■□□ 2.31
CPNE1-207ENST00000414664 DNAJC25-GNG10A0A024R161 153 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 DDAH1O94760 285 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 SGPL1O95470 568 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 MLLT1Q03111 559 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-207ENST00000414664 ADCK5Q3MIX3 580 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 ZNF654Q8IZM8 581 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 STAG2Q8N3U4 1231 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 U2AF1L4Q8WU68 220 aaKnown RBP29.47■■■□□ 2.31
CPNE1-207ENST00000414664 VAT1LQ9HCJ6 419 aa29.47■■■□□ 2.31
CPNE1-207ENST00000414664 PFASO15067 1338 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 IGHA2P01877 340 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CALM1P0DP23 149 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CALM2P0DP24 149 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CALM3P0DP25 149 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CYP2C19P33261 490 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CDC37Q16543 378 aaPredicted RBP29.46■■■□□ 2.31
CPNE1-207ENST00000414664 CTCFLQ8NI51 663 aaPredicted RBP29.46■■■□□ 2.31
CPNE1-207ENST00000414664 NUP133Q8WUM0 1156 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 GPHNQ9NQX3 736 aaPredicted RBP29.46■■■□□ 2.31
CPNE1-207ENST00000414664 SNX14Q9Y5W7 946 aa29.46■■■□□ 2.31
CPNE1-207ENST00000414664 KIF5BP33176 963 aa29.45■■■□□ 2.31
CPNE1-207ENST00000414664 EXOSC10Q01780 885 aaKnown RBP29.45■■■□□ 2.31
CPNE1-207ENST00000414664 MSL3Q8N5Y2 521 aaKnown RBP29.45■■■□□ 2.31
CPNE1-207ENST00000414664 USP26Q9BXU7 913 aa29.45■■■□□ 2.31
CPNE1-207ENST00000414664 LRRC2Q9BYS8 371 aa29.45■■■□□ 2.31
CPNE1-207ENST00000414664 JMJD4Q9H9V9 463 aa29.45■■■□□ 2.31
CPNE1-207ENST00000414664 A1CFQ9NQ94 594 aaKnown RBP29.45■■■□□ 2.31
CPNE1-207ENST00000414664 POTEB2H3BUK9 544 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 TFRCP02786 760 aaKnown RBP29.44■■■□□ 2.3
CPNE1-207ENST00000414664 PSMA5P28066 241 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 COL9A3Q14050 684 aaPredicted RBP29.44■■■□□ 2.3
CPNE1-207ENST00000414664 MUM1L1Q5H9M0 696 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 SYNE3Q6ZMZ3 975 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 ZNF467Q7Z7K2 595 aaPredicted RBP29.44■■■□□ 2.3
CPNE1-207ENST00000414664 TINF2Q9BSI4 451 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 SLC12A7Q9Y666 1083 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 PLXNA1Q9UIW2 1896 aa29.44■■■□□ 2.3
CPNE1-207ENST00000414664 SGMS1Q86VZ5 419 aa29.43■■■□□ 2.3
CPNE1-207ENST00000414664 JAKMIP1Q96N16 626 aaKnown RBP29.43■■■□□ 2.3
CPNE1-207ENST00000414664 NRBP1Q9UHY1 535 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms