RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 KCTD2Q14681 263 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 GRM4Q14833 912 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 BLOC1S2Q6QNY1 142 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 DPP9Q86TI2 863 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 ZNF654Q8IZM8 581 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 AGBL1Q96MI9 1066 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 TCEANC2Q96MN5 208 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 MMP19Q99542 508 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 APBA2Q99767 749 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 BIN2Q9UBW5 565 aaPredicted RBP15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 MAD2L2Q9UI95 211 aa15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 BAZ2BQ9UIF8 2168 aaKnown RBP15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 KIAA0100Q14667 2235 aaKnown RBP15.71■□□□□ 0.11
SNCAIP-206ENST00000414317 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 KLRF2D3W0D1 207 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 DHX16O60231 1041 aaKnown RBP15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 DDAH1O94760 285 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 ICAM1P05362 532 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 TKFCQ3LXA3 575 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 TRMT44Q8IYL2 757 aaKnown RBP15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 ADGRF4Q8IZF3 695 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 NUP133Q8WUM0 1156 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 ZNF333Q96JL9 665 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 MAP3K14Q99558 947 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 FBXO40Q9UH90 709 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 HOXC6P09630 235 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 ALAS1P13196 640 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 CPA1P15085 419 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 CASTP20810 708 aaKnown RBP15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 UBXN2AP68543 259 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 SGMS1Q86VZ5 419 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 CTCFLQ8NI51 663 aaPredicted RBP15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 HOMER2Q9NSB8 354 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 RNF146Q9NTX7 359 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 SLC5A4Q9NY91 659 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 PNMA2Q9UL42 364 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 SLC12A7Q9Y666 1083 aa15.7■□□□□ 0.1
SNCAIP-206ENST00000414317 HMGCRP04035 888 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 CALM1P0DP23 149 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 CALM2P0DP24 149 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 CALM3P0DP25 149 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 RPS6KB1P23443 525 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 KIF5BP33176 963 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 FGD1P98174 961 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 TRIB2Q92519 343 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 MYL10Q9BUA6 226 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 ACAD9Q9H845 621 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 VAT1LQ9HCJ6 419 aa15.69■□□□□ 0.1
SNCAIP-206ENST00000414317 COBLO75128 1261 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 CAPN15O75808 1086 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 INHAP05111 366 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 C8orf34Q49A92 452 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 ANKRD35Q8N283 1001 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 DDX11Q96FC9 970 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 TM6SF1Q9BZW5 370 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 JMJD4Q9H9V9 463 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 BRCA2P51587 3418 aa15.68■□□□□ 0.1
SNCAIP-206ENST00000414317 SEC24BO95487 1268 aa15.67■□□□□ 0.1
SNCAIP-206ENST00000414317 MYCP01106 439 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-206ENST00000414317 CCL14Q16627 93 aa15.67■□□□□ 0.1
SNCAIP-206ENST00000414317 Q6ZUG5 572 aa15.67■□□□□ 0.1
SNCAIP-206ENST00000414317 ZSWIM6Q9HCJ5 1215 aa15.67■□□□□ 0.1
SNCAIP-206ENST00000414317 PGK2P07205 417 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 TAL1P17542 331 aaPredicted RBP15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 RXRAP19793 462 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 GNAQP50148 359 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 ANAPC15P60006 121 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MTFR1Q15390 333 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 APOA5Q6Q788 366 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 RUFY3Q7L099 469 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MICU3Q86XE3 530 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 RIOX1Q9H6W3 641 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 CYP46A1Q9Y6A2 500 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 QRICH1Q2TAL8 776 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 ZNF792Q3KQV3 632 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 USH1GQ495M9 461 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MUM1L1Q5H9M0 696 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MFSD14CQ5VZR4 134 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 OLFML2BQ68BL8 750 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 RAB11FIP4Q86YS3 637 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 CCDC144CPQ8IYA2 1237 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 FBXL16Q8N461 479 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 FANCBQ8NB91 859 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MTMR8Q96EF0 704 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 MAML3Q96JK9 1138 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 LZTS2Q9BRK4 669 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 FLRT1Q9NZU1 646 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
SNCAIP-206ENST00000414317 DIS3Q9Y2L1 958 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms