RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 INHAP05111 366 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 ICAM1P05362 532 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 HOXC6P09630 235 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 ELNP15502 786 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 PSMA5P28066 241 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 LIFRP42702 1097 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 GRM4Q14833 912 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHMP3-205ENST00000409810 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
CHMP3-205ENST00000409810 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 KCNB2Q92953 911 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 ACAD9Q9H845 621 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 LY9Q9HBG7 655 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 CCPG1Q9ULG6 757 aa12.72□□□□□ -0.37
CHMP3-205ENST00000409810 ZNF536O15090 1300 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 CALM1P0DP23 149 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 CALM2P0DP24 149 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 CALM3P0DP25 149 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 ALAS1P13196 640 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 KIF5BP33176 963 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 MFSD14CQ5VZR4 134 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 OLFML2BQ68BL8 750 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 BLOC1S2Q6QNY1 142 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 SYNE3Q6ZMZ3 975 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
CHMP3-205ENST00000409810 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 TRIB2Q92519 343 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 DDX11Q96FC9 970 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 JAKMIP1Q96N16 626 aaKnown RBP12.71□□□□□ -0.37
CHMP3-205ENST00000409810 MAP3K14Q99558 947 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 RNF146Q9NTX7 359 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
CHMP3-205ENST00000409810 PFASO15067 1338 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 BRCA2P51587 3418 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 KLRF2D3W0D1 207 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 SOX10P56693 466 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 FGD1P98174 961 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 TROAPQ12815 778 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
CHMP3-205ENST00000409810 ADCK5Q3MIX3 580 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 ANKRD35Q8N283 1001 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 TRERF1Q96PN7 1200 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 USP26Q9BXU7 913 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 MAD2L2Q9UI95 211 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 DIS3Q9Y2L1 958 aaKnown RBP12.7□□□□□ -0.38
CHMP3-205ENST00000409810 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 SNX14Q9Y5W7 946 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 MCM3APO60318 1980 aa12.7□□□□□ -0.38
CHMP3-205ENST00000409810 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-205ENST00000409810 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-205ENST00000409810 CCL5P13501 91 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 CAPN2P17655 700 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 GNAQP50148 359 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 SNAP25P60880 206 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
CHMP3-205ENST00000409810 ADGRF4Q8IZF3 695 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 STAG2Q8N3U4 1231 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 NPLOC4Q8TAT6 608 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 LRRC2Q9BYS8 371 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 SENP2Q9HC62 589 aa12.69□□□□□ -0.38
CHMP3-205ENST00000409810 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
CHMP3-205ENST00000409810 RPTORQ8N122 1335 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 COBLO75128 1261 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CHMP3-205ENST00000409810 CASTP20810 708 aaKnown RBP12.68□□□□□ -0.38
CHMP3-205ENST00000409810 TRAF1Q13077 416 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 MTFR1Q15390 333 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 CCL14Q16627 93 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 MSL3Q8N5Y2 521 aaKnown RBP12.68□□□□□ -0.38
CHMP3-205ENST00000409810 MAML3Q96JK9 1138 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 CPVLQ9H3G5 476 aa12.68□□□□□ -0.38
CHMP3-205ENST00000409810 ABCB11O95342 1321 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 ZBTB5O15062 677 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 PGK2P07205 417 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 GJB1P08034 283 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 RCAN1P53805 252 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 ANAPC15P60006 121 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 USH1GQ495M9 461 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 MAP3K21Q5TCX8 1036 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 MICU3Q86XE3 530 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 FBXO11Q86XK2 927 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 MYL10Q9BUA6 226 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 MAF1Q9H063 256 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.67□□□□□ -0.38
CHMP3-205ENST00000409810 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
CHMP3-205ENST00000409810 A1CFQ9NQ94 594 aaKnown RBP12.67□□□□□ -0.38
CHMP3-205ENST00000409810 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms