RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 OFD1O75665 1012 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 GDF11O95390 407 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 VIL1P09327 827 aaKnown RBP23.49■■□□□ 1.35
USP39-203ENST00000409470 ICA1Q05084 483 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 ABCB5Q2M3G0 1257 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.49■■□□□ 1.35
USP39-203ENST00000409470 NEK8Q86SG6 692 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 CSRNP1Q96S65 589 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 IFNKQ9P0W0 207 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 PSME4Q14997 1843 aa23.49■■□□□ 1.35
USP39-203ENST00000409470 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
USP39-203ENST00000409470 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
USP39-203ENST00000409470 DLGAP5Q15398 846 aa23.48■■□□□ 1.35
USP39-203ENST00000409470 CCDC144BQ3MJ40 725 aa23.48■■□□□ 1.35
USP39-203ENST00000409470 TMEM260Q9NX78 707 aa23.48■■□□□ 1.35
USP39-203ENST00000409470 TCP10L2B9ZVM9 353 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 SLC1A4P43007 532 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 E2F4Q16254 413 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 SLFN13Q68D06 897 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 TBCKQ8TEA7 893 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 XPO4Q9C0E2 1151 aaKnown RBP23.47■■□□□ 1.35
USP39-203ENST00000409470 USP17L10C9JJH3 530 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 CDC25AP30304 524 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 PPP1R18Q6NYC8 613 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 NIM1KQ8IY84 436 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 DCAF4Q8WV16 495 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 PYCARDQ9ULZ3 195 aa23.47■■□□□ 1.35
USP39-203ENST00000409470 ZBTB12Q9Y330 459 aaPredicted RBP23.47■■□□□ 1.35
USP39-203ENST00000409470 CLRN2A0PK11 232 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 ZBTB5O15062 677 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 ZBTB7AO95365 584 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 CASP1P29466 404 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 PRPHP41219 470 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 DPYDQ12882 1025 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 RBM26Q5T8P6 1007 aaKnown RBP23.46■■□□□ 1.35
USP39-203ENST00000409470 RASSF8Q8NHQ8 419 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 HSD3B7Q9H2F3 369 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 PIM2Q9P1W9 311 aa23.46■■□□□ 1.35
USP39-203ENST00000409470 NEMFO60524 1076 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 FANCCQ00597 558 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 NOLC1Q14978 699 aaKnown RBP eCLIP23.45■■□□□ 1.35
USP39-203ENST00000409470 PDXDC2PQ6P474 469 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 FILIP1Q7Z7B0 1213 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 C17orf53Q8N3J3 647 aaPredicted RBP23.45■■□□□ 1.35
USP39-203ENST00000409470 STAMQ92783 540 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 GMLQ99445 158 aa23.45■■□□□ 1.35
USP39-203ENST00000409470 COL2A1P02458 1487 aaPredicted RBP23.45■■□□□ 1.34
USP39-203ENST00000409470 OR52Z1P0C646 297 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 ATP1A3P13637 1013 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 UBA7P41226 1012 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 STAT6P42226 847 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 LRMPQ12912 555 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 KARSQ15046 597 aaKnown RBP23.45■■□□□ 1.34
USP39-203ENST00000409470 KIAA1524Q8TCG1 905 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 GSDMAQ96QA5 445 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 FANCLQ9NW38 375 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 ZNF70Q9UC06 446 aaPredicted RBP23.45■■□□□ 1.34
USP39-203ENST00000409470 ZNRF3Q9ULT6 936 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 COL4A5P29400 1685 aa23.45■■□□□ 1.34
USP39-203ENST00000409470 PPP1R11O60927 126 aaPredicted RBP23.44■■□□□ 1.34
USP39-203ENST00000409470 NAP1L5Q96NT1 182 aaPredicted RBP23.44■■□□□ 1.34
USP39-203ENST00000409470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.44■■□□□ 1.34
USP39-203ENST00000409470 RIC8AQ9NPQ8 531 aa23.44■■□□□ 1.34
USP39-203ENST00000409470 MYO1BO43795 1136 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 SERPINC1P01008 464 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 GH2P01242 217 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 SIAH1Q8IUQ4 282 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 MTMR8Q96EF0 704 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 PP2D1A8MPX8 630 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 TGFB2P61812 414 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 ORC2Q13416 577 aaPredicted RBP23.43■■□□□ 1.34
USP39-203ENST00000409470 CACTINQ8WUQ7 758 aaKnown RBP23.43■■□□□ 1.34
USP39-203ENST00000409470 CUL5Q93034 780 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 BLZF1Q9H2G9 400 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 DISC1Q9NRI5 854 aa23.43■■□□□ 1.34
USP39-203ENST00000409470 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
USP39-203ENST00000409470 KIF13BQ9NQT8 1826 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 FMR1Q06787 632 aaKnown RBP eCLIP23.42■■□□□ 1.343e-6■■■□□ 16.1
USP39-203ENST00000409470 RRAGBQ5VZM2 374 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 ENOX1Q8TC92 643 aaKnown RBP23.42■■□□□ 1.34
USP39-203ENST00000409470 ATF5Q9Y2D1 282 aaPredicted RBP23.42■■□□□ 1.34
USP39-203ENST00000409470 F5H6K3 240 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 CBFA2T2O43439 604 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 GTPBP6O43824 516 aaPredicted RBP23.42■■□□□ 1.34
USP39-203ENST00000409470 POLD1P28340 1107 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 MRPL12P52815 198 aaKnown RBP23.42■■□□□ 1.34
USP39-203ENST00000409470 KLRC3Q07444 240 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 FAM151AQ8WW52 585 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 VEZTQ9HBM0 779 aa23.42■■□□□ 1.34
USP39-203ENST00000409470 UBASH3AP57075 661 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 UBE2SQ16763 222 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 LRRC8AQ8IWT6 810 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 TRMT44Q8IYL2 757 aaKnown RBP23.41■■□□□ 1.34
USP39-203ENST00000409470 AK8Q96MA6 479 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 CCSER1Q9C0I3 900 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 IMPACTQ9P2X3 320 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 NFE2L3Q9Y4A8 694 aa23.41■■□□□ 1.34
USP39-203ENST00000409470 ERCC5P28715 1186 aaPredicted RBP23.4■■□□□ 1.34
USP39-203ENST00000409470 TNNI2P48788 182 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms