RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SLC5A4Q9NY91 659 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 FLRT1Q9NZU1 646 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 FBXO40Q9UH90 709 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 RBBP6Q7Z6E9 1792 aaKnown RBP22.45■■□□□ 1.18
RTN4-207ENST00000402434 BRCA2P51587 3418 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 ICAM1P05362 532 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 PARP1P09874 1014 aaKnown RBP22.45■■□□□ 1.18
RTN4-207ENST00000402434 SNAP25P60880 206 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 TRIM32Q13049 653 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 TMEM87BQ96K49 555 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 RNF208Q9H0X6 261 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 LY9Q9HBG7 655 aa22.45■■□□□ 1.18
RTN4-207ENST00000402434 GJB1P08034 283 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 SLC4A3P48751 1232 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 TROAPQ12815 778 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 KRT32Q14532 448 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 TKFCQ3LXA3 575 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 OLFML2BQ68BL8 750 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 CCDC174Q6PII3 467 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 TMTC2Q8N394 836 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 NEK1Q96PY6 1258 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 UBA5Q9GZZ9 404 aa22.44■■□□□ 1.18
RTN4-207ENST00000402434 RPTORQ8N122 1335 aa22.43■■□□□ 1.18
RTN4-207ENST00000402434 ADCK5Q3MIX3 580 aa22.43■■□□□ 1.18
RTN4-207ENST00000402434 PAK6Q9NQU5 681 aaPredicted RBP22.43■■□□□ 1.18
RTN4-207ENST00000402434 PNMA2Q9UL42 364 aa22.43■■□□□ 1.18
RTN4-207ENST00000402434 DIS3Q9Y2L1 958 aaKnown RBP22.43■■□□□ 1.18
RTN4-207ENST00000402434 DNAJC25-GNG10A0A024R161 153 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 PALM3A6NDB9 673 aaPredicted RBP22.42■■□□□ 1.18
RTN4-207ENST00000402434 SH2B2O14492 632 aaPredicted RBP22.42■■□□□ 1.18
RTN4-207ENST00000402434 PGK2P07205 417 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 LIFRP42702 1097 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 EXOSC10Q01780 885 aaKnown RBP22.42■■□□□ 1.18
RTN4-207ENST00000402434 CACNB2Q08289 660 aaPredicted RBP22.42■■□□□ 1.18
RTN4-207ENST00000402434 ZNF792Q3KQV3 632 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 STAG2Q8N3U4 1231 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 CPVLQ9H3G5 476 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 GPHNQ9NQX3 736 aaPredicted RBP22.42■■□□□ 1.18
RTN4-207ENST00000402434 MAD2L2Q9UI95 211 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 SMCHD1A6NHR9 2005 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 WDR19Q8NEZ3 1342 aa22.42■■□□□ 1.18
RTN4-207ENST00000402434 PRKAR2AP13861 404 aaKnown RBP22.41■■□□□ 1.18
RTN4-207ENST00000402434 GRM4Q14833 912 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 MFSD14CQ5VZR4 134 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 CATIPQ7Z7H3 387 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 MAML3Q96JK9 1138 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 TRERF1Q96PN7 1200 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 ACAD9Q9H845 621 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 HMX1Q9NP08 348 aaPredicted RBP22.41■■□□□ 1.18
RTN4-207ENST00000402434 HOMER2Q9NSB8 354 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 RNF146Q9NTX7 359 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 CCPG1Q9ULG6 757 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 KLRF2D3W0D1 207 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 ALAS1P13196 640 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 EN2P19622 333 aaPredicted RBP22.41■■□□□ 1.18
RTN4-207ENST00000402434 GJA8P48165 433 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 DHX32Q7L7V1 743 aaKnown RBP22.41■■□□□ 1.18
RTN4-207ENST00000402434 DDX11Q96FC9 970 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 MAP3K14Q99558 947 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
RTN4-207ENST00000402434 HMGB1P09429 215 aaKnown RBP22.4■■□□□ 1.18
RTN4-207ENST00000402434 ANKRD35Q8N283 1001 aa22.4■■□□□ 1.18
RTN4-207ENST00000402434 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.184e-7■■■■■ 30.7
RTN4-207ENST00000402434 SNX14Q9Y5W7 946 aa22.4■■□□□ 1.18
RTN4-207ENST00000402434 DDAH1O94760 285 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 SGPL1O95470 568 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 CYP2C19P33261 490 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 MUM1L1Q5H9M0 696 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 ZNF654Q8IZM8 581 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 U2AF1L4Q8WU68 220 aaKnown RBP22.39■■□□□ 1.17
RTN4-207ENST00000402434 JMJD4Q9H9V9 463 aa22.39■■□□□ 1.17
RTN4-207ENST00000402434 A1CFQ9NQ94 594 aaKnown RBP22.39■■□□□ 1.17
RTN4-207ENST00000402434 CAPN2P17655 700 aa22.38■■□□□ 1.17
RTN4-207ENST00000402434 MTMR8Q96EF0 704 aa22.38■■□□□ 1.17
RTN4-207ENST00000402434 DEFB118Q96PH6 123 aa22.38■■□□□ 1.17
RTN4-207ENST00000402434 LRRC2Q9BYS8 371 aa22.38■■□□□ 1.17
RTN4-207ENST00000402434 CCDC69A6NI79 296 aa22.37■■□□□ 1.17
RTN4-207ENST00000402434 CDC37Q16543 378 aaPredicted RBP22.37■■□□□ 1.17
RTN4-207ENST00000402434 ZNF467Q7Z7K2 595 aaPredicted RBP22.37■■□□□ 1.17
RTN4-207ENST00000402434 MSL3Q8N5Y2 521 aaKnown RBP22.37■■□□□ 1.17
RTN4-207ENST00000402434 SHISA4Q96DD7 197 aa22.37■■□□□ 1.17
RTN4-207ENST00000402434 CRISPLD2Q9H0B8 497 aa22.37■■□□□ 1.17
RTN4-207ENST00000402434 RIOX1Q9H6W3 641 aa22.37■■□□□ 1.17
RTN4-207ENST00000402434 PLXNA1Q9UIW2 1896 aa22.37■■□□□ 1.17
RTN4-207ENST00000402434 CYBAP13498 195 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 TAL1P17542 331 aaPredicted RBP22.36■■□□□ 1.17
RTN4-207ENST00000402434 CCND3P30281 292 aaPredicted RBP22.36■■□□□ 1.17
RTN4-207ENST00000402434 SLC35G1Q2M3R5 365 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 NFXL1Q6ZNB6 911 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 FAM133AQ8N9E0 248 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 CLEC4DQ8WXI8 215 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 TINF2Q9BSI4 451 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 VAT1LQ9HCJ6 419 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 PFASO15067 1338 aa22.36■■□□□ 1.17
RTN4-207ENST00000402434 QRICH1Q2TAL8 776 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 MAMDC4Q6UXC1 1216 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 TRPV1Q8NER1 839 aa22.35■■□□□ 1.17
RTN4-207ENST00000402434 NUP133Q8WUM0 1156 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms