RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 LHX8Q68G74 356 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 TRPV1Q8NER1 839 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 CHST13Q8NET6 341 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 GPCPD1Q9NPB8 672 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
APTR-201ENST00000398043 CEP290O15078 2479 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 IKQ13123 557 aaPredicted RBP19.6■□□□□ 0.73
APTR-201ENST00000398043 KCTD2Q14681 263 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 SYDE2Q5VT97 1194 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 KIAA1211Q6ZU35 1233 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 MB21D2Q8IYB1 491 aaPredicted RBP19.6■□□□□ 0.73
APTR-201ENST00000398043 FGD4Q96M96 766 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 SLC5A4Q9NY91 659 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 OGDHLQ9ULD0 1010 aa19.6■□□□□ 0.73
APTR-201ENST00000398043 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
APTR-201ENST00000398043 CDC45O75419 566 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 ANTXR2P58335 489 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 COL9A3Q14050 684 aaPredicted RBP19.59■□□□□ 0.73
APTR-201ENST00000398043 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 GPATCH4Q5T3I0 446 aaKnown RBP19.59■□□□□ 0.73
APTR-201ENST00000398043 NCOA7Q8NI08 942 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 UBAC1Q9BSL1 405 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 KAT14Q9H8E8 782 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 FBXO40Q9UH90 709 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 CTDP1Q9Y5B0 961 aaPredicted RBP19.59■□□□□ 0.73
APTR-201ENST00000398043 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
APTR-201ENST00000398043 SLC27A2O14975 620 aa19.58■□□□□ 0.72
APTR-201ENST00000398043 ICAM1P05362 532 aa19.58■□□□□ 0.72
APTR-201ENST00000398043 GOLGA8HP0CJ92 632 aa19.58■□□□□ 0.72
APTR-201ENST00000398043 TRDNQ13061 729 aa19.58■□□□□ 0.72
APTR-201ENST00000398043 SENP2Q9HC62 589 aa19.58■□□□□ 0.72
APTR-201ENST00000398043 TFRCP02786 760 aaKnown RBP19.57■□□□□ 0.72
APTR-201ENST00000398043 MUM1L1Q5H9M0 696 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
APTR-201ENST00000398043 CREB3L3Q68CJ9 461 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 CCDC174Q6PII3 467 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 MAMDC4Q6UXC1 1216 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 ANKLE1Q8NAG6 615 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 IGDCC4Q8TDY8 1250 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 ACAD9Q9H845 621 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 ANO2Q9NQ90 1003 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 RNF146Q9NTX7 359 aa19.57■□□□□ 0.72
APTR-201ENST00000398043 FARP2O94887 1054 aaPredicted RBP19.56■□□□□ 0.72
APTR-201ENST00000398043 TAL1P17542 331 aaPredicted RBP19.56■□□□□ 0.72
APTR-201ENST00000398043 SLC4A3P48751 1232 aa19.56■□□□□ 0.72
APTR-201ENST00000398043 ZNF467Q7Z7K2 595 aaPredicted RBP19.56■□□□□ 0.72
APTR-201ENST00000398043 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
APTR-201ENST00000398043 TINF2Q9BSI4 451 aa19.56■□□□□ 0.72
APTR-201ENST00000398043 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
APTR-201ENST00000398043 A1CFQ9NQ94 594 aaKnown RBP19.56■□□□□ 0.72
APTR-201ENST00000398043 HOMER2Q9NSB8 354 aa19.56■□□□□ 0.72
APTR-201ENST00000398043 ALAS1P13196 640 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 ASPRV1Q53RT3 343 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 PRAMEF19Q5SWL8 479 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 RALYLQ86SE5 291 aaKnown RBP19.55■□□□□ 0.72
APTR-201ENST00000398043 MSL3Q8N5Y2 521 aaKnown RBP19.55■□□□□ 0.72
APTR-201ENST00000398043 FAM133AQ8N9E0 248 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 DIS3LQ8TF46 1054 aaKnown RBP19.55■□□□□ 0.72
APTR-201ENST00000398043 DDX11Q96FC9 970 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 UBA5Q9GZZ9 404 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 DDX20Q9UHI6 824 aaKnown RBP19.55■□□□□ 0.72
APTR-201ENST00000398043 NRBP1Q9UHY1 535 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 CCPG1Q9ULG6 757 aa19.55■□□□□ 0.72
APTR-201ENST00000398043 WDR19Q8NEZ3 1342 aa19.54■□□□□ 0.72
APTR-201ENST00000398043 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
APTR-201ENST00000398043 ANKRD35Q8N283 1001 aa19.54■□□□□ 0.72
APTR-201ENST00000398043 STAG2Q8N3U4 1231 aa19.54■□□□□ 0.72
APTR-201ENST00000398043 MTA3Q9BTC8 594 aa19.54■□□□□ 0.72
APTR-201ENST00000398043 ASTN1O14525 1302 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 SYNGAP1Q96PV0 1343 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 SEPT4O43236 478 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 SNAI1O95863 264 aaPredicted RBP19.53■□□□□ 0.72
APTR-201ENST00000398043 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
APTR-201ENST00000398043 CNTN2Q02246 1040 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 TSGA10IPQ3SY00 556 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 CASC1Q6TDU7 716 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 ADGRF4Q8IZF3 695 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 CLEC4DQ8WXI8 215 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 PAWRQ96IZ0 340 aaKnown RBP19.53■□□□□ 0.72
APTR-201ENST00000398043 MAD2L2Q9UI95 211 aa19.53■□□□□ 0.72
APTR-201ENST00000398043 PFASO15067 1338 aa19.52■□□□□ 0.72
APTR-201ENST00000398043 PALM3A6NDB9 673 aaPredicted RBP19.52■□□□□ 0.72
APTR-201ENST00000398043 MSCO60682 206 aa19.52■□□□□ 0.72
APTR-201ENST00000398043 ZNF865P0CJ78 1059 aaPredicted RBP19.52■□□□□ 0.72
APTR-201ENST00000398043 TROAPQ12815 778 aa19.52■□□□□ 0.72
APTR-201ENST00000398043 LY9Q9HBG7 655 aa19.52■□□□□ 0.72
APTR-201ENST00000398043 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
APTR-201ENST00000398043 CYP39A1Q9NYL5 469 aa19.52■□□□□ 0.72
APTR-201ENST00000398043 DNAH12Q6ZR08 3092 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 SOWAHBA6NEL2 793 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 NFIBO00712 420 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 COL6A1P12109 1028 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 CNGA1P29973 690 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 GRM4Q14833 912 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 WTAPQ15007 396 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
APTR-201ENST00000398043 KCNB2Q92953 911 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms