RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 EIF5BO60841 1220 aaKnown RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 HMGB1P09429 215 aaKnown RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 EN2P19622 333 aaPredicted RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 CACNB2Q08289 660 aaPredicted RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 CCDC174Q6PII3 467 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 CATIPQ7Z7H3 387 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 MSL3Q8N5Y2 521 aaKnown RBP21.97■■□□□ 1.11
COLCA2-201ENST00000398035 AGBL1Q96MI9 1066 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 TRERF1Q96PN7 1200 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.97■■□□□ 1.118e-6■□□□□ 10.8
COLCA2-201ENST00000398035 CCPG1Q9ULG6 757 aa21.97■■□□□ 1.11
COLCA2-201ENST00000398035 PRC1O43663 620 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 ZNF792Q3KQV3 632 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 RASGRP2Q7LDG7 609 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 MAML3Q96JK9 1138 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 NEK1Q96PY6 1258 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 NRBP1Q9UHY1 535 aa21.96■■□□□ 1.11
COLCA2-201ENST00000398035 IGHA2P01877 340 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 GOLGA8HP0CJ92 632 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 ALAS1P13196 640 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 CHST3Q7LGC8 479 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 DEFB118Q96PH6 123 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 MAP3K14Q99558 947 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 MAF1Q9H063 256 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 FLRT1Q9NZU1 646 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 ZSWIM8A7E2V4 1837 aa21.95■■□□□ 1.1
COLCA2-201ENST00000398035 MSCO60682 206 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 TFRCP02786 760 aaKnown RBP21.94■■□□□ 1.1
COLCA2-201ENST00000398035 PGK2P07205 417 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 LIFRP42702 1097 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 ANTXR2P58335 489 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 TRIM32Q13049 653 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 UBA5Q9GZZ9 404 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 HOMER2Q9NSB8 354 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 RLFQ13129 1914 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 PFASO15067 1338 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 WDR19Q8NEZ3 1342 aa21.94■■□□□ 1.1
COLCA2-201ENST00000398035 DNAJC25-GNG10A0A024R161 153 aa21.93■■□□□ 1.1
COLCA2-201ENST00000398035 KLRF2D3W0D1 207 aa21.93■■□□□ 1.1
COLCA2-201ENST00000398035 TRAF1Q13077 416 aa21.93■■□□□ 1.1
COLCA2-201ENST00000398035 ZNF467Q7Z7K2 595 aaPredicted RBP21.93■■□□□ 1.1
COLCA2-201ENST00000398035 ADGRF4Q8IZF3 695 aa21.93■■□□□ 1.1
COLCA2-201ENST00000398035 TINF2Q9BSI4 451 aa21.93■■□□□ 1.1
COLCA2-201ENST00000398035 A0A0G2JMZ2 1700 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 MGAMO43451 1857 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 PALM3A6NDB9 673 aaPredicted RBP21.92■■□□□ 1.1
COLCA2-201ENST00000398035 CCDC69A6NI79 296 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 CYP2C19P33261 490 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 HSPA4P34932 840 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 SNAP25P60880 206 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 TROAPQ12815 778 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 NFXL1Q6ZNB6 911 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 DHX32Q7L7V1 743 aaKnown RBP21.92■■□□□ 1.1
COLCA2-201ENST00000398035 KCNB2Q92953 911 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 CRISPLD2Q9H0B8 497 aa21.92■■□□□ 1.1
COLCA2-201ENST00000398035 DHX16O60231 1041 aaKnown RBP21.91■■□□□ 1.1
COLCA2-201ENST00000398035 DDAH1O94760 285 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 CALM1P0DP23 149 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 CALM2P0DP24 149 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 CALM3P0DP25 149 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 KIF5BP33176 963 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 ANKLE1Q8NAG6 615 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 LY9Q9HBG7 655 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 MAD2L2Q9UI95 211 aa21.91■■□□□ 1.1
COLCA2-201ENST00000398035 POTEB2H3BUK9 544 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 HTTP42858 3142 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 GRM4Q14833 912 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 LAMA4Q16363 1823 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 MAMDC4Q6UXC1 1216 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 SYNE3Q6ZMZ3 975 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 RASEFQ8IZ41 740 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 LZTS2Q9BRK4 669 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 CNPY2Q9Y2B0 182 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 MYH4Q9Y623 1939 aa21.9■■□□□ 1.1
COLCA2-201ENST00000398035 SYNGAP1Q96PV0 1343 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 SH2B2O14492 632 aaPredicted RBP21.89■■□□□ 1.1
COLCA2-201ENST00000398035 PSMA5P28066 241 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 SMARCA1P28370 1054 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 GNAQP50148 359 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 RGS22Q8NE09 1264 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 CTCFLQ8NI51 663 aaPredicted RBP21.89■■□□□ 1.1
COLCA2-201ENST00000398035 JMJD4Q9H9V9 463 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 VAT1LQ9HCJ6 419 aa21.89■■□□□ 1.1
COLCA2-201ENST00000398035 A1CFQ9NQ94 594 aaKnown RBP21.89■■□□□ 1.1
COLCA2-201ENST00000398035 CYBAP13498 195 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 CNGA1P29973 690 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 CCND3P30281 292 aaPredicted RBP21.89■■□□□ 1.09
COLCA2-201ENST00000398035 EXOSC10Q01780 885 aaKnown RBP21.89■■□□□ 1.09
COLCA2-201ENST00000398035 CDC37Q16543 378 aaPredicted RBP21.89■■□□□ 1.09
COLCA2-201ENST00000398035 SGMS1Q86VZ5 419 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 ZNF654Q8IZM8 581 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 STAG2Q8N3U4 1231 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 OGDHLQ9ULD0 1010 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 SLC12A7Q9Y666 1083 aa21.89■■□□□ 1.09
COLCA2-201ENST00000398035 SEPT4O43236 478 aa21.88■■□□□ 1.09
COLCA2-201ENST00000398035 NSMFQ6X4W1 530 aa21.88■■□□□ 1.09
COLCA2-201ENST00000398035 FAM133AQ8N9E0 248 aa21.88■■□□□ 1.09
COLCA2-201ENST00000398035 NUP133Q8WUM0 1156 aa21.88■■□□□ 1.09
COLCA2-201ENST00000398035 SHISA4Q96DD7 197 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms