RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
AL390728.1-201ENST00000397642 MB21D2Q8IYB1 491 aaPredicted RBP12.49□□□□□ -0.41
AL390728.1-201ENST00000397642 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
AL390728.1-201ENST00000397642 HOMER2Q9NSB8 354 aa12.49□□□□□ -0.41
AL390728.1-201ENST00000397642 ANTXR2P58335 489 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 MFSD14CQ5VZR4 134 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 CHST13Q8NET6 341 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 DDX11Q96FC9 970 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 UBA5Q9GZZ9 404 aa12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 ZNFX1Q9P2E3 1918 aaKnown RBP12.48□□□□□ -0.41
AL390728.1-201ENST00000397642 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 ALAS1P13196 640 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 CYP2C19P33261 490 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 MCM5P33992 734 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 WTAPQ15007 396 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 IGDCC4Q8TDY8 1250 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 RANBP17Q9H2T7 1088 aaKnown RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 CPVLQ9H3G5 476 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 SENP2Q9HC62 589 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 FBXO40Q9UH90 709 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 TNRC18O15417 2968 aaPredicted RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 PRC1O43663 620 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 ICAM1P05362 532 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 GJA8P48165 433 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 COL9A3Q14050 684 aaPredicted RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 ANKRD35Q8N283 1001 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 TRERF1Q96PN7 1200 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
AL390728.1-201ENST00000397642 SMCHD1A6NHR9 2005 aa12.46□□□□□ -0.41
AL390728.1-201ENST00000397642 REC8O95072 547 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 SGPL1O95470 568 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 RASEFQ8IZ41 740 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 MAML3Q96JK9 1138 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 ACAD9Q9H845 621 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 RNF146Q9NTX7 359 aa12.46□□□□□ -0.42
AL390728.1-201ENST00000397642 CEP290O15078 2479 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 IGHA2P01877 340 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 ZNF792Q3KQV3 632 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TKFCQ3LXA3 575 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 ADGRF4Q8IZF3 695 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 STAG2Q8N3U4 1231 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 MTA3Q9BTC8 594 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 VAT1LQ9HCJ6 419 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 DIS3Q9Y2L1 958 aaKnown RBP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 DNAJC25-GNG10A0A024R161 153 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 CCND3P30281 292 aaPredicted RBP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TROAPQ12815 778 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 MUM1L1Q5H9M0 696 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 CATIPQ7Z7H3 387 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 SHISA4Q96DD7 197 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 LY9Q9HBG7 655 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 MAD2L2Q9UI95 211 aa12.45□□□□□ -0.42
AL390728.1-201ENST00000397642 BAZ2BQ9UIF8 2168 aaKnown RBP12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 CNGA1P29973 690 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 KRT32Q14532 448 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 ADCK5Q3MIX3 580 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 NFXL1Q6ZNB6 911 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 TINF2Q9BSI4 451 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 A1CFQ9NQ94 594 aaKnown RBP12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
AL390728.1-201ENST00000397642 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 HSPA4P34932 840 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 NUP133Q8WUM0 1156 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 CCDC69A6NI79 296 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 CYBAP13498 195 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 LIFRP42702 1097 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 CNTN2Q02246 1040 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 GRM4Q14833 912 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 NSMFQ6X4W1 530 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 TRPV1Q8NER1 839 aa12.43□□□□□ -0.42
AL390728.1-201ENST00000397642 MYL10Q9BUA6 226 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms