RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RIPK3Q9Y572 518 aa29.6■■■□□ 2.33
TSPAN4-207ENST00000397411 SNX14Q9Y5W7 946 aa29.6■■■□□ 2.33
TSPAN4-207ENST00000397411 ZNFX1Q9P2E3 1918 aaKnown RBP29.6■■■□□ 2.33
TSPAN4-207ENST00000397411 ALAS1P13196 640 aa29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 TKFCQ3LXA3 575 aa29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 CHST13Q8NET6 341 aa29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 KCNB2Q92953 911 aa29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 JAKMIP1Q96N16 626 aaKnown RBP29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 RANBP17Q9H2T7 1088 aaKnown RBP29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 GPHNQ9NQX3 736 aaPredicted RBP29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 CCPG1Q9ULG6 757 aa29.59■■■□□ 2.33
TSPAN4-207ENST00000397411 SH2B2O14492 632 aaPredicted RBP29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 INHAP05111 366 aa29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 PSMA5P28066 241 aa29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 SYNE3Q6ZMZ3 975 aa29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 CPVLQ9H3G5 476 aa29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 PNMA2Q9UL42 364 aa29.58■■■□□ 2.33
TSPAN4-207ENST00000397411 KLRF2D3W0D1 207 aa29.57■■■□□ 2.32
TSPAN4-207ENST00000397411 HMGCRP04035 888 aa29.57■■■□□ 2.32
TSPAN4-207ENST00000397411 ANKRD35Q8N283 1001 aa29.57■■■□□ 2.32
TSPAN4-207ENST00000397411 TRERF1Q96PN7 1200 aa29.57■■■□□ 2.32
TSPAN4-207ENST00000397411 ZNF536O15090 1300 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 WDR19Q8NEZ3 1342 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 ICAM1P05362 532 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 LIFRP42702 1097 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 SOX10P56693 466 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 GRM4Q14833 912 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 BLOC1S2Q6QNY1 142 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 ADGRF4Q8IZF3 695 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 ZNF654Q8IZM8 581 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 CTCFLQ8NI51 663 aaPredicted RBP29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 RNF146Q9NTX7 359 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 SLC12A7Q9Y666 1083 aa29.56■■■□□ 2.32
TSPAN4-207ENST00000397411 CCL14Q16627 93 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 MFSD14CQ5VZR4 134 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 STAG2Q8N3U4 1231 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 NPLOC4Q8TAT6 608 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 TRIB2Q92519 343 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 TCEANC2Q96MN5 208 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 ACAD9Q9H845 621 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 MAD2L2Q9UI95 211 aa29.55■■■□□ 2.32
TSPAN4-207ENST00000397411 PALM3A6NDB9 673 aaPredicted RBP29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 COBLO75128 1261 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 PGK2P07205 417 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 HOXC6P09630 235 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 CCL5P13501 91 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 EXOSC10Q01780 885 aaKnown RBP29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 TROAPQ12815 778 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 COL9A3Q14050 684 aaPredicted RBP29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 RNF208Q9H0X6 261 aa29.54■■■□□ 2.32
TSPAN4-207ENST00000397411 DDAH1O94760 285 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 CALM1P0DP23 149 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 CALM2P0DP24 149 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 CALM3P0DP25 149 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 KIF5BP33176 963 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 MTFR1Q15390 333 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 MYL10Q9BUA6 226 aa29.53■■■□□ 2.32
TSPAN4-207ENST00000397411 CDC37Q16543 378 aaPredicted RBP29.52■■■□□ 2.32
TSPAN4-207ENST00000397411 NAP1L2Q9ULW6 460 aaPredicted RBP29.52■■■□□ 2.32
TSPAN4-207ENST00000397411 GTF3C3Q9Y5Q9 886 aa29.52■■■□□ 2.32
TSPAN4-207ENST00000397411 CPA1P15085 419 aa29.51■■■□□ 2.31
TSPAN4-207ENST00000397411 CASTP20810 708 aaKnown RBP29.51■■■□□ 2.31
TSPAN4-207ENST00000397411 MAP3K14Q99558 947 aa29.51■■■□□ 2.31
TSPAN4-207ENST00000397411 UNC93B1Q9H1C4 597 aa29.51■■■□□ 2.31
TSPAN4-207ENST00000397411 HMX1Q9NP08 348 aaPredicted RBP29.51■■■□□ 2.31
TSPAN4-207ENST00000397411 GNAQP50148 359 aa29.5■■■□□ 2.31
TSPAN4-207ENST00000397411 TRIM32Q13049 653 aa29.5■■■□□ 2.31
TSPAN4-207ENST00000397411 USH1GQ495M9 461 aa29.5■■■□□ 2.31
TSPAN4-207ENST00000397411 JMJD4Q9H9V9 463 aa29.5■■■□□ 2.31
TSPAN4-207ENST00000397411 MYH6P13533 1939 aa29.49■■■□□ 2.31
TSPAN4-207ENST00000397411 NSMFQ6X4W1 530 aa29.49■■■□□ 2.31
TSPAN4-207ENST00000397411 SGMS1Q86VZ5 419 aa29.49■■■□□ 2.31
TSPAN4-207ENST00000397411 CCDC144CPQ8IYA2 1237 aa29.49■■■□□ 2.31
TSPAN4-207ENST00000397411 FLRT1Q9NZU1 646 aa29.49■■■□□ 2.31
TSPAN4-207ENST00000397411 ZNF236Q9UL36 1845 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 PRKAR2AP13861 404 aaKnown RBP29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 RXRAP19793 462 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 RPS6KB1P23443 525 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 MUM1L1Q5H9M0 696 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 OLFML2BQ68BL8 750 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 Q6ZUG5 572 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 FBXO11Q86XK2 927 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 RAB11FIP4Q86YS3 637 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 MAML3Q96JK9 1138 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 LZTS2Q9BRK4 669 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 DIS3Q9Y2L1 958 aaKnown RBP29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 CYP46A1Q9Y6A2 500 aa29.48■■■□□ 2.31
TSPAN4-207ENST00000397411 RPTORQ8N122 1335 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 SMCHD1A6NHR9 2005 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 POTEB2H3BUK9 544 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 TAL1P17542 331 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 CACNB2Q08289 660 aaPredicted RBP29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 QRICH1Q2TAL8 776 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 ZNF792Q3KQV3 632 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 HOMER1Q86YM7 354 aa29.47■■■□□ 2.31
TSPAN4-207ENST00000397411 PFASO15067 1338 aa29.46■■■□□ 2.31
TSPAN4-207ENST00000397411 PLXNA1Q9UIW2 1896 aa29.46■■■□□ 2.31
TSPAN4-207ENST00000397411 CYP2C19P33261 490 aa29.46■■■□□ 2.31
TSPAN4-207ENST00000397411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.46■■■□□ 2.315e-6■■■■■ 45.5
TSPAN4-207ENST00000397411 MICU3Q86XE3 530 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms