RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-206ENST00000397021 ANKRD35Q8N283 1001 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 STAG2Q8N3U4 1231 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 DDX11Q96FC9 970 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 MAML3Q96JK9 1138 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
MCF2L-206ENST00000397021 VAT1LQ9HCJ6 419 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 RNF146Q9NTX7 359 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 CCPG1Q9ULG6 757 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 MGAMO43451 1857 aa11.33□□□□□ -0.6
MCF2L-206ENST00000397021 ERICH2A1L162 156 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 PRC1O43663 620 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
MCF2L-206ENST00000397021 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
MCF2L-206ENST00000397021 FDX1P10109 184 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 ZNF792Q3KQV3 632 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 ANO1Q5XXA6 986 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 OLFML2BQ68BL8 750 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
MCF2L-206ENST00000397021 LRRC2Q9BYS8 371 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 SLC5A4Q9NY91 659 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
MCF2L-206ENST00000397021 FARP2O94887 1054 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 IGHA2P01877 340 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 ICAM1P05362 532 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 CYBAP13498 195 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 WTAPQ15007 396 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 ASPRV1Q53RT3 343 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 NSMFQ6X4W1 530 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 IGDCC4Q8TDY8 1250 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 TCEANC2Q96MN5 208 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 A1CFQ9NQ94 594 aaKnown RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
MCF2L-206ENST00000397021 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
MCF2L-206ENST00000397021 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 NFIBO00712 420 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 MCM5P33992 734 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
MCF2L-206ENST00000397021 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 USH1GQ495M9 461 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 LHX8Q68G74 356 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 PAWRQ96IZ0 340 aaKnown RBP11.3□□□□□ -0.6
MCF2L-206ENST00000397021 FGD4Q96M96 766 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 TINF2Q9BSI4 451 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 JMJD4Q9H9V9 463 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 LY9Q9HBG7 655 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 DDX20Q9UHI6 824 aaKnown RBP11.3□□□□□ -0.6
MCF2L-206ENST00000397021 MAD2L2Q9UI95 211 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
MCF2L-206ENST00000397021 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 SOWAHBA6NEL2 793 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 KLRF2D3W0D1 207 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 POTEB2H3BUK9 544 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 SH2B2O14492 632 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-206ENST00000397021 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-206ENST00000397021 CPA1P15085 419 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 RXRAP19793 462 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 BAATQ14032 418 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-206ENST00000397021 GRM4Q14833 912 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 SLC35G1Q2M3R5 365 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 NFXL1Q6ZNB6 911 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 UBE2Q1Q7Z7E8 422 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 CATIPQ7Z7H3 387 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 LENG1Q96BZ8 264 aaPredicted RBP11.29□□□□□ -0.6
MCF2L-206ENST00000397021 NEK1Q96PY6 1258 aa11.29□□□□□ -0.6
MCF2L-206ENST00000397021 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
MCF2L-206ENST00000397021 PTPDC1A2A3K4 754 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-206ENST00000397021 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-206ENST00000397021 CALML3P27482 149 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
MCF2L-206ENST00000397021 TROAPQ12815 778 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
MCF2L-206ENST00000397021 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 CLEC4DQ8WXI8 215 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 TBC1D5Q92609 795 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 CYP39A1Q9NYL5 469 aa11.28□□□□□ -0.6
MCF2L-206ENST00000397021 ZHX1Q9UKY1 873 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms