RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TMEM60Q9H2L4 133 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 IFNKQ9P0W0 207 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-202ENST00000396033 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
ITGB1-202ENST00000396033 ENTPD3O75355 529 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.2
ITGB1-202ENST00000396033 KCNA3P22001 575 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 ADCY7P51828 1080 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 LETM2Q2VYF4 491 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 JAKMIP3Q5VZ66 844 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 SMAP1Q8IYB5 467 aaPredicted RBP13.77□□□□□ -0.2
ITGB1-202ENST00000396033 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 PSME4Q14997 1843 aa13.77□□□□□ -0.2
ITGB1-202ENST00000396033 PSMD14O00487 310 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 GDF11O95390 407 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 SLC16A2P36021 539 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 MLKLQ8NB16 471 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 ATRNL1Q5VV63 1379 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 CCNT1O60563 726 aaKnown RBP13.77□□□□□ -0.21
ITGB1-202ENST00000396033 ICA1Q05084 483 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 E2F4Q16254 413 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 TATDN1Q6P1N9 297 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 NEK8Q86SG6 692 aa13.77□□□□□ -0.21
ITGB1-202ENST00000396033 XPO4Q9C0E2 1151 aaKnown RBP13.77□□□□□ -0.21
ITGB1-202ENST00000396033 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 LAD1O00515 517 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 CASP1P29466 404 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 LRMPQ12912 555 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 SEPT2Q15019 361 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 NYAP2Q9P242 653 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 NOLC1Q14978 699 aaKnown RBP eCLIP13.76□□□□□ -0.21
ITGB1-202ENST00000396033 TMEM179Q6ZVK1 233 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 TBCKQ8TEA7 893 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 CSRNP1Q96S65 589 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 TMEM260Q9NX78 707 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 ATP1A3P13637 1013 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 CDC25AP30304 524 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 FANCCQ00597 558 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 DPYDQ12882 1025 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 ABCB5Q2M3G0 1257 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
ITGB1-202ENST00000396033 COL4A5P29400 1685 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 SLC1A4P43007 532 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 KIAA1524Q8TCG1 905 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 STAMQ92783 540 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 CLRN2A0PK11 232 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 TCP10L2B9ZVM9 353 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 NEMFO60524 1076 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 VIL1P09327 827 aaKnown RBP13.75□□□□□ -0.21
ITGB1-202ENST00000396033 PRPHP41219 470 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 KARSQ15046 597 aaKnown RBP13.75□□□□□ -0.21
ITGB1-202ENST00000396033 SLFN13Q68D06 897 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 DCAF4Q8WV16 495 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 MKL1Q969V6 931 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 COL2A1P02458 1487 aaPredicted RBP13.75□□□□□ -0.21
ITGB1-202ENST00000396033 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 STAT6P42226 847 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 DMTNQ08495 405 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 DLGAP5Q15398 846 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 OGFOD1Q8N543 542 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 FANCLQ9NW38 375 aa13.75□□□□□ -0.21
ITGB1-202ENST00000396033 ZBTB12Q9Y330 459 aaPredicted RBP13.75□□□□□ -0.21
ITGB1-202ENST00000396033 PP2D1A8MPX8 630 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 ZBTB5O15062 677 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
ITGB1-202ENST00000396033 SERPINC1P01008 464 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.212e-15■■■□□ 17.5
ITGB1-202ENST00000396033 NIM1KQ8IY84 436 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 CACTINQ8WUQ7 758 aaKnown RBP13.74□□□□□ -0.21
ITGB1-202ENST00000396033 GSDMAQ96QA5 445 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 TRMT44Q8IYL2 757 aaKnown RBP13.74□□□□□ -0.21
ITGB1-202ENST00000396033 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 DISC1Q9NRI5 854 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 MYO1BO43795 1136 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 UBA7P41226 1012 aa13.74□□□□□ -0.21
ITGB1-202ENST00000396033 RBM26Q5T8P6 1007 aaKnown RBP13.74□□□□□ -0.21
ITGB1-202ENST00000396033 GH2P01242 217 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 GMLQ99445 158 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 RIC8AQ9NPQ8 531 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 SPTLC3Q9NUV7 552 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 CBFA2T2O43439 604 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 ARID5BQ14865 1188 aa13.73□□□□□ -0.21
ITGB1-202ENST00000396033 DNTTIP2Q5QJE6 756 aaKnown RBP13.73□□□□□ -0.21
ITGB1-202ENST00000396033 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms