RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 KLRF2D3W0D1 207 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 DHX16O60231 1041 aaKnown RBP23.22■■□□□ 1.31
SNCA-203ENST00000394986 ADORA2AP29274 412 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 SLC9C1Q4G0N8 1177 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 Q6ZUG5 572 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 SGMS1Q86VZ5 419 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 TMTC2Q8N394 836 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 VAT1LQ9HCJ6 419 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 BRPF3Q9ULD4 1205 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 CCPG1Q9ULG6 757 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 SLC12A7Q9Y666 1083 aa23.22■■□□□ 1.31
SNCA-203ENST00000394986 ADCY3O60266 1144 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 ICAM1P05362 532 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 ALAS1P13196 640 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 FGD1P98174 961 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 MAP2K5Q13163 448 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 IRF5Q13568 498 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 NBPF11Q86T75 865 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 MICU3Q86XE3 530 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 ZSWIM6Q9HCJ5 1215 aa23.21■■□□□ 1.31
SNCA-203ENST00000394986 GRK4P32298 578 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 COPB2P35606 906 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 CDC37Q16543 378 aaPredicted RBP23.2■■□□□ 1.3
SNCA-203ENST00000394986 APOA5Q6Q788 366 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 RUFY3Q7L099 469 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 BRF1Q92994 677 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 MMP19Q99542 508 aa23.2■■□□□ 1.3
SNCA-203ENST00000394986 DOCK3Q8IZD9 2030 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 KLF18A0A0U1RQI7 1052 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
SNCA-203ENST00000394986 MYCP01106 439 aaPredicted RBP23.19■■□□□ 1.3
SNCA-203ENST00000394986 FCER1AP12319 257 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 RGS2P41220 211 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 APOBRQ0VD83 1088 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 CCL14Q16627 93 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 SLAIN1Q8ND83 568 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 CTCFLQ8NI51 663 aaPredicted RBP23.19■■□□□ 1.3
SNCA-203ENST00000394986 NPLOC4Q8TAT6 608 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 RNF146Q9NTX7 359 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
SNCA-203ENST00000394986 STRNO43815 780 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 COBLO75128 1261 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 PGK2P07205 417 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 MUM1L1Q5H9M0 696 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 TRIB2Q92519 343 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 TRERF1Q96PN7 1200 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 APBA2Q99767 749 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 TM6SF1Q9BZW5 370 aa23.18■■□□□ 1.3
SNCA-203ENST00000394986 NAP1L2Q9ULW6 460 aaPredicted RBP23.18■■□□□ 1.3
SNCA-203ENST00000394986 CYTH3O43739 400 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 PLEKHA8P1O95397 391 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 ANAPC15P60006 121 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 KCTD2Q14681 263 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 USH1GQ495M9 461 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 DPP9Q86TI2 863 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 HOMER1Q86YM7 354 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 CMTR1Q8N1G2 835 aaKnown RBP23.17■■□□□ 1.3
SNCA-203ENST00000394986 CHST13Q8NET6 341 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 ARMC5Q96C12 935 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 MAP3K14Q99558 947 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 ACAD9Q9H845 621 aa23.17■■□□□ 1.3
SNCA-203ENST00000394986 BIN2Q9UBW5 565 aaPredicted RBP23.17■■□□□ 1.3
SNCA-203ENST00000394986 CALM1P0DP23 149 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 CALM2P0DP24 149 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 CALM3P0DP25 149 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 KIF5BP33176 963 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 TRIM32Q13049 653 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 SYNE3Q6ZMZ3 975 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 ABRAQ8N0Z2 381 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 PXYLP1Q8TE99 480 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 PIBF1Q8WXW3 757 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 ZNF333Q96JL9 665 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 FLRT1Q9NZU1 646 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 CCDC85CA6NKD9 419 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 ZBTB43O43298 467 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 INHAP05111 366 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 XRCC5P13010 732 aaKnown RBP23.16■■□□□ 1.3
SNCA-203ENST00000394986 TOB2Q14106 344 aaPredicted RBP23.16■■□□□ 1.3
SNCA-203ENST00000394986 TKFCQ3LXA3 575 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 FANCBQ8NB91 859 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 PIGSQ96S52 555 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 AGXT2Q9BYV1 514 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 RIOX1Q9H6W3 641 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 FBXO40Q9UH90 709 aa23.16■■□□□ 1.3
SNCA-203ENST00000394986 ZNF236Q9UL36 1845 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 GOLGA8BA8MQT2 603 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 NFIBO00712 420 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 PPP1R11O60927 126 aaPredicted RBP23.15■■□□□ 1.3
SNCA-203ENST00000394986 HOXC6P09630 235 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 ANKRD35Q8N283 1001 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 SRBD1Q8N5C6 995 aaKnown RBP23.15■■□□□ 1.3
SNCA-203ENST00000394986 MTMR8Q96EF0 704 aa23.15■■□□□ 1.3
SNCA-203ENST00000394986 LARP6Q9BRS8 491 aaKnown RBP23.15■■□□□ 1.3
SNCA-203ENST00000394986 GOLGA8AA7E2F4 631 aa23.14■■□□□ 1.29
SNCA-203ENST00000394986 MTFR1Q15390 333 aa23.14■■□□□ 1.29
SNCA-203ENST00000394986 TMTC3Q6ZXV5 915 aa23.14■■□□□ 1.29
SNCA-203ENST00000394986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.14■■□□□ 1.29
SNCA-203ENST00000394986 FBXL16Q8N461 479 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms