RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 HFE2Q6ZVN8 426 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 C3orf67Q6ZVT6 689 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SYDE1Q6ZW31 735 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MICALCLQ6ZW33 695 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 USP43Q70EL4 1123 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HTR3DQ70Z44 454 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LARP4Q71RC2 724 aaKnown RBP eCLIP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GAREM2Q75VX8 874 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MARK2Q7KZI7 788 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MEPCEQ7L2J0 689 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF765Q7L2R6 523 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF771Q7L3S4 317 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RSRC2Q7L4I2 434 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DHX32Q7L7V1 743 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 VASH1Q7L8A9 365 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 OTOP1Q7RTM1 612 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ERMP1Q7Z2K6 904 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KANSL1Q7Z3B3 1105 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LYSMD3Q7Z3D4 306 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ARMC9Q7Z3E5 817 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMC7Q7Z402 723 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMC4Q7Z404 712 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMPRSS9Q7Z410 1059 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNK18Q7Z418 384 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF438Q7Z4V0 828 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PODNQ7Z5L7 613 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 IRF2BP2Q7Z5L9 587 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMC3Q7Z5M5 1100 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BMP8AQ7Z5Y6 402 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SPRED1Q7Z699 444 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BTLAQ7Z6A9 289 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GRASPQ7Z6J2 395 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 THAP5Q7Z6K1 395 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXO33Q7Z6M2 555 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB44Q7Z6P3 723 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 STRA8Q7Z7C7 330 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ABI3BPQ7Z7G0 1075 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 B3GNT8Q7Z7M8 397 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZAR1Q86SH2 424 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR149Q86SP6 731 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADGRE4PQ86SQ3 457 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SYT9Q86SS6 491 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SMIM29Q86T20 159 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTSL2Q86TH1 951 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ATG4DQ86TL0 474 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SYVN1Q86TM6 617 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SAPCD2Q86UD0 394 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLCO6A1Q86UG4 719 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RTN4RL1Q86UN2 441 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CDH24Q86UP0 819 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM74Q86UV6 250 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM73Q86UV7 250 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 FERMT3Q86UX7 667 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ALYREFQ86V81 257 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SATL1Q86VE3 508 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PACS2Q86VP3 889 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPYL5Q86VY4 417 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NLRP13Q86W25 1043 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NLRP10Q86W26 655 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 METTL16Q86W50 562 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PPFIBP1Q86W92 1011 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BPHLQ86WA6 291 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 C12orf40Q86WS4 652 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMPRSS12Q86WS5 348 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF227Q86WZ6 799 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NCAPG2Q86XI2 1143 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF761Q86XN6 746 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MEX3DQ86XN8 651 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 COL23A1Q86Y22 540 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KRT73Q86Y46 540 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MIB1Q86YT6 1006 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TREML1Q86YW5 311 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RFX6Q8HWS3 928 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMPRSS6Q8IU80 811 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 KRTAP11-1Q8IUC1 163 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 NPAS4Q8IUM7 802 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 RELL1Q8IUW5 271 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SYT12Q8IV01 421 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 VRK3Q8IV63 474 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC9A9Q8IVB4 645 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MCATQ8IVS2 390 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC103Q8IW40 242 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SLITRK4Q8IW52 837 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 PLEKHM2Q8IWE5 1019 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 HSCBQ8IWL3 235 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 BRSK2Q8IWQ3 736 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CHERPQ8IWX8 916 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SCUBE1Q8IWY4 988 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZSCAN29Q8IWY8 852 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIM42Q8IWZ5 723 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZFPM1Q8IX07 1006 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 CTAGE4Q8IX94 777 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 GALNT12Q8IXK2 581 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 MRPL41Q8IXM3 137 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 DMRTC2Q8IXT2 367 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 ZC3H3Q8IXZ2 948 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM192Q8IY95 271 aa-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SRRM1Q8IYB3 904 aaKnown RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 LRRC56Q8IYG6 542 aaPredicted RBP-0.04□□□□□ -2.42
TRAJ54-201ENST00000390484 SEPT12Q8IYM1 358 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms