RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ATP1A3P13637 1013 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 TXLNAP40222 546 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 DPYDQ12882 1025 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 LETM2Q2VYF4 491 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 KCTD1Q719H9 257 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 NEK8Q86SG6 692 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 MKL1Q969V6 931 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
ACTN4-202ENST00000390009 NYAP2Q9P242 653 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 RAD17O75943 681 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 CASP1P29466 404 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 CDC25AP30304 524 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 FANCCQ00597 558 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 JAKMIP3Q5VZ66 844 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 PDXDC2PQ6P474 469 aa20.63■□□□□ 0.89
ACTN4-202ENST00000390009 CACTINQ8WUQ7 758 aaKnown RBP20.63■□□□□ 0.89
ACTN4-202ENST00000390009 COL2A1P02458 1487 aaPredicted RBP20.63■□□□□ 0.89
ACTN4-202ENST00000390009 PSMD14O00487 310 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 CCNT1O60563 726 aaKnown RBP20.62■□□□□ 0.89
ACTN4-202ENST00000390009 SLC16A2P36021 539 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 PRPHP41219 470 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 ADCY7P51828 1080 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 TBCKQ8TEA7 893 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 GSDMAQ96QA5 445 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 SPTLC3Q9NUV7 552 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 VIL1P09327 827 aaKnown RBP20.62■□□□□ 0.89
ACTN4-202ENST00000390009 SEPT2Q15019 361 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 TMEM179Q6ZVK1 233 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 FILIP1Q7Z7B0 1213 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 NAP1L5Q96NT1 182 aaPredicted RBP20.62■□□□□ 0.89
ACTN4-202ENST00000390009 FANCLQ9NW38 375 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 TMEM260Q9NX78 707 aa20.62■□□□□ 0.89
ACTN4-202ENST00000390009 MYO1BO43795 1136 aa20.61■□□□□ 0.89
ACTN4-202ENST00000390009 PPP1R11O60927 126 aaPredicted RBP20.61■□□□□ 0.89
ACTN4-202ENST00000390009 FMR1Q06787 632 aaKnown RBP eCLIP20.61■□□□□ 0.896e-7■■■■□ 19.6
ACTN4-202ENST00000390009 PPP1R18Q6NYC8 613 aa20.61■□□□□ 0.89
ACTN4-202ENST00000390009 STAMQ92783 540 aa20.61■□□□□ 0.89
ACTN4-202ENST00000390009 SPDYE2BA6NHP3 402 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 USP17L10C9JJH3 530 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 ZBTB5O15062 677 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 RAD21O60216 631 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 NEMFO60524 1076 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 GDF11O95390 407 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 SPDYE6P0CI01 402 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 ICA1Q05084 483 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 ABCB5Q2M3G0 1257 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 SIAH1Q8IUQ4 282 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 LRRC8AQ8IWT6 810 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 MTMR8Q96EF0 704 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 CSRNP1Q96S65 589 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 GMLQ99445 158 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 TMOD2Q9NZR1 351 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 OR52Z1P0C646 297 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 SLC1A4P43007 532 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 KARSQ15046 597 aaKnown RBP20.6■□□□□ 0.89
ACTN4-202ENST00000390009 ENOX1Q8TC92 643 aaKnown RBP20.6■□□□□ 0.89
ACTN4-202ENST00000390009 DCAF4Q8WV16 495 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 MTRQ99707 1265 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 DISC1Q9NRI5 854 aa20.6■□□□□ 0.89
ACTN4-202ENST00000390009 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 STAT6P42226 847 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 ARID5BQ14865 1188 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 IMPACTQ9P2X3 320 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 HDAC9Q9UKV0 1011 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 SERPINC1P01008 464 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 ORC2Q13416 577 aaPredicted RBP20.59■□□□□ 0.89
ACTN4-202ENST00000390009 VPS33BQ9H267 617 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 BLZF1Q9H2G9 400 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 RIC8AQ9NPQ8 531 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 NFE2L3Q9Y4A8 694 aa20.59■□□□□ 0.89
ACTN4-202ENST00000390009 TCP10L2B9ZVM9 353 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 GTPBP6O43824 516 aaPredicted RBP20.58■□□□□ 0.89
ACTN4-202ENST00000390009 ERCC5P28715 1186 aaPredicted RBP20.58■□□□□ 0.89
ACTN4-202ENST00000390009 UBA7P41226 1012 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 UBASH3AP57075 661 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 DLGAP5Q15398 846 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 CT47A1Q5JQC4 288 aaPredicted RBP20.58■□□□□ 0.89
ACTN4-202ENST00000390009 TRMT44Q8IYL2 757 aaKnown RBP20.58■□□□□ 0.89
ACTN4-202ENST00000390009 OGFOD1Q8N543 542 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 CCSER1Q9C0I3 900 aa20.58■□□□□ 0.89
ACTN4-202ENST00000390009 ZBTB12Q9Y330 459 aaPredicted RBP20.58■□□□□ 0.89
ACTN4-202ENST00000390009 CLRN2A0PK11 232 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 GSDMDP57764 484 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 TMC6Q7Z403 805 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 RASSF8Q8NHQ8 419 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 DPF2Q92785 391 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 AK8Q96MA6 479 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 MED15Q96RN5 788 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 MYH7BA7E2Y1 1941 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 CBFA2T2O43439 604 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 CUL4BQ13620 913 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 NAALADL2Q58DX5 795 aa20.57■□□□□ 0.88
ACTN4-202ENST00000390009 RBM26Q5T8P6 1007 aaKnown RBP20.57■□□□□ 0.88
ACTN4-202ENST00000390009 ZNF70Q9UC06 446 aaPredicted RBP20.57■□□□□ 0.88
ACTN4-202ENST00000390009 GH2P01242 217 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 CD44P16070 742 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 JAG1P78504 1218 aa20.56■□□□□ 0.88
ACTN4-202ENST00000390009 RRP1BQ14684 758 aaKnown RBP20.56■□□□□ 0.88
ACTN4-202ENST00000390009 RRAGBQ5VZM2 374 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms