RNA–Protein interactions for RNA: ENST00000386847.1

SNORA48-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48-201ENST00000386847 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
SNORA48-201ENST00000386847 TRIM43Q96BQ3 446 aaPredicted RBP11.29□□□□□ -0.6
SNORA48-201ENST00000386847 GMCL1Q96IK5 515 aa11.29□□□□□ -0.6
SNORA48-201ENST00000386847 MPHOSPH6Q99547 160 aaKnown RBP11.29□□□□□ -0.6
SNORA48-201ENST00000386847 MTIF3Q9H2K0 278 aaKnown RBP11.29□□□□□ -0.6
SNORA48-201ENST00000386847 EPB41L4AQ9HCS5 686 aaPredicted RBP11.29□□□□□ -0.6
SNORA48-201ENST00000386847 PNMA2Q9UL42 364 aa11.29□□□□□ -0.6
SNORA48-201ENST00000386847 RIPK3Q9Y572 518 aa11.29□□□□□ -0.6
SNORA48-201ENST00000386847 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 SNAI1O95863 264 aaPredicted RBP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 ASGR1P07306 291 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 ALAS1P13196 640 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 MCCP23508 829 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 CST5P28325 142 aaPredicted RBP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 PPIGQ13427 754 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 CCDC96Q2M329 555 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 CCDC144BQ3MJ40 725 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 CCDC129Q6ZRS4 1044 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 AP5M1Q9H0R1 490 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
SNORA48-201ENST00000386847 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
SNORA48-201ENST00000386847 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.27□□□□□ -0.61
SNORA48-201ENST00000386847 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.27□□□□□ -0.61
SNORA48-201ENST00000386847 CABYRO75952 493 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 TIMP1P01033 207 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 FOSL2P15408 326 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 TNFAIP2Q03169 654 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 ZMYM1Q5SVZ6 1142 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 RCSD1Q6JBY9 416 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 LENG1Q96BZ8 264 aaPredicted RBP11.27□□□□□ -0.61
SNORA48-201ENST00000386847 TRERF1Q96PN7 1200 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 SEZ6LQ9BYH1 1024 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 SEMA6BQ9H3T3 888 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 PARP14Q460N5 1801 aa11.27□□□□□ -0.61
SNORA48-201ENST00000386847 PLXNA1Q9UIW2 1896 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 COL6A3P12111 3177 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 B4DLN1 442 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 ARVCFO00192 962 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 PLA2G6O60733 806 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 MRPL12P52815 198 aaKnown RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 GJA9P57773 515 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 FAAP100Q0VG06 881 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 BRDTQ58F21 947 aaPredicted RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 TICAM2Q86XR7 235 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 KLHDC9Q8NEP7 349 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 MAFAQ8NHW3 353 aaPredicted RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 DCAF4Q8WV16 495 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 GUCD1Q96NT3 240 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 SEC62Q99442 399 aaKnown RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 ADD3Q9UEY8 706 aaKnown RBP11.26□□□□□ -0.61
SNORA48-201ENST00000386847 CCPG1Q9ULG6 757 aa11.26□□□□□ -0.61
SNORA48-201ENST00000386847 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 RRP12Q5JTH9 1297 aaKnown RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 PSRC1Q6PGN9 363 aaPredicted RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 NSMFQ6X4W1 530 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 KCTD1Q719H9 257 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 UPF3AQ9H1J1 476 aaKnown RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 A1CFQ9NQ94 594 aaKnown RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 RAD50Q92878 1312 aa11.25□□□□□ -0.61
SNORA48-201ENST00000386847 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
SNORA48-201ENST00000386847 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 ICAM1P05362 532 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
SNORA48-201ENST00000386847 CNTN2Q02246 1040 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 CTDSPL2Q05D32 466 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 FSCN1Q16658 493 aaKnown RBP11.24□□□□□ -0.61
SNORA48-201ENST00000386847 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 IQSEC1Q6DN90 963 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
SNORA48-201ENST00000386847 GPHNQ9NQX3 736 aaPredicted RBP11.24□□□□□ -0.61
SNORA48-201ENST00000386847 PRR12Q9ULL5 1215 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 Q9Y3F1 56 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 MYH4Q9Y623 1939 aa11.24□□□□□ -0.61
SNORA48-201ENST00000386847 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 PTPDC1A2A3K4 754 aa11.23□□□□□ -0.61
SNORA48-201ENST00000386847 DYNC1LI2O43237 492 aaPredicted RBP11.23□□□□□ -0.61
SNORA48-201ENST00000386847 ORC4O43929 436 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms