RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TRIM42Q8IWZ5 723 aa16.64■□□□□ 0.26
VLDLR-202ENST00000382099 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.26
VLDLR-202ENST00000382099 INCENPQ9NQS7 918 aa16.64■□□□□ 0.26
VLDLR-202ENST00000382099 HPSEQ9Y251 543 aa16.64■□□□□ 0.26
VLDLR-202ENST00000382099 KCNQ3O43525 872 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 ATP6V1G1O75348 118 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 OATP04181 439 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 MYL1P05976 194 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 CASP1P29466 404 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 GALNT15Q8N3T1 639 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 CCDC197Q8NCU1 140 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
VLDLR-202ENST00000382099 ZSCAN9O15535 394 aaPredicted RBP16.64■□□□□ 0.25
VLDLR-202ENST00000382099 RNASE9P60153 205 aaKnown RBP16.64■□□□□ 0.25
VLDLR-202ENST00000382099 SPATA1Q5VX52 437 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 CCT6BQ92526 530 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
VLDLR-202ENST00000382099 PPP1R12CQ9BZL4 782 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
VLDLR-202ENST00000382099 CREB3O43889 395 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 LMNTD2Q8IXW0 634 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 IFT20Q8IY31 132 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 RAPGEF5Q92565 580 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 PCDHGA4Q9Y5G9 962 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.63■□□□□ 0.25
VLDLR-202ENST00000382099 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 UBXN1Q04323 297 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 NUGGCQ68CJ6 796 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 KIF2BQ8N4N8 673 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 ARL10Q8N8L6 244 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 NAF1Q96HR8 494 aaKnown RBP16.63■□□□□ 0.25
VLDLR-202ENST00000382099 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
VLDLR-202ENST00000382099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.63■□□□□ 0.25
VLDLR-202ENST00000382099 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 A8MUI8 341 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 MAP3K13O43283 966 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 KCNJ2P63252 427 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 CCDC57Q2TAC2 916 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 LONP2Q86WA8 852 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 VPS37DQ86XT2 251 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 PRDM16Q9HAZ2 1276 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 HEXIM1O94992 359 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 ATP2A2P16615 1042 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 KRT83P78385 493 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 LACTB2Q53H82 288 aaPredicted RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 NFRKBQ6P4R8 1299 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 MTHFD1LQ6UB35 978 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 MMGT1Q8N4V1 131 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 LRRC37A3O60309 1634 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 MED23Q9ULK4 1368 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 A6NHS1 94 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 PPIP5K2O43314 1243 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 HERVK_113P62684 666 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 KIF5AQ12840 1032 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 ZMYM1Q5SVZ6 1142 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 IQCKQ8N0W5 287 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 ABCF2Q9UG63 623 aa16.62■□□□□ 0.25
VLDLR-202ENST00000382099 NOVA2Q9UNW9 492 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 LUC7L2Q9Y383 392 aaKnown RBP16.62■□□□□ 0.25
VLDLR-202ENST00000382099 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 BICD1Q96G01 975 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 CTNND2Q9UQB3 1225 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 M0R2C6 588 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 MAGEA10P43363 369 aaPredicted RBP16.61■□□□□ 0.25
VLDLR-202ENST00000382099 ZBED6P86452 979 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 AIMP1Q12904 312 aaKnown RBP16.61■□□□□ 0.25
VLDLR-202ENST00000382099 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 DNAAF2Q9NVR5 837 aaKnown RBP16.61■□□□□ 0.25
VLDLR-202ENST00000382099 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
VLDLR-202ENST00000382099 TPD52L2O43399 206 aaKnown RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 TUBP50607 506 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 HAND2P61296 217 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 MORC3Q14149 939 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 DNAJC14Q6Y2X3 702 aaPredicted RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 ARMC9Q7Z3E5 817 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 CAVIN3Q969G5 261 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 UBE2OQ9C0C9 1292 aaKnown RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 TBC1D2BQ9UPU7 963 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 SALL1Q9NSC2 1324 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 CCND1P24385 295 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 ALDH5A1P51649 535 aaPredicted RBP16.6■□□□□ 0.25
VLDLR-202ENST00000382099 TMEM154Q6P9G4 183 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 KLHDC4Q8TBB5 520 aa16.6■□□□□ 0.25
VLDLR-202ENST00000382099 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms