RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 POLR2AP24928 1970 aaKnown RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 DDAH1O94760 285 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 YEATS4O95619 227 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 VEGFAP15692 232 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 SART3Q15020 963 aaKnown RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 PTPAQ15257 358 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 CCDC186Q7Z3E2 898 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 FBXO18Q8NFZ0 1043 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 CLRN2A0PK11 232 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 B4E1Z4 1266 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 TCP10L2B9ZVM9 353 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 CCT2P78371 535 aaKnown RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 KIF23Q02241 960 aaPredicted RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 SUPT20HL1Q3ZLR7 823 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 TMEM179Q6ZVK1 233 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 CHST3Q7LGC8 479 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 IQCA1Q86XH1 822 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 LRRC8AQ8IWT6 810 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 SPC24Q8NBT2 197 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 ADAMTS19Q8TE59 1207 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
CDKL5-202ENST00000379996 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
CDKL5-202ENST00000379996 NDUFA8P51970 172 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CACNB3P54284 484 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 FKBP1BP68106 108 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 RCSD1Q6JBY9 416 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 DYNLL2Q96FJ2 89 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ZNF341Q9BYN7 854 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 NYAP2Q9P242 653 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ASTN2O75129 1339 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-202ENST00000379996 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CTNND1O60716 968 aaKnown RBP8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CALM1P0DP23 149 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CALM2P0DP24 149 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CALM3P0DP25 149 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 SMARCA1P28370 1054 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 C6orf132Q5T0Z8 1188 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ZNF444Q8N0Y2 327 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-202ENST00000379996 PTPRFP10586 1907 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 SMIM22K7EJ46 135 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 SNHG28P0DPA3 235 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ARID5BQ14865 1188 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ENAHQ8N8S7 591 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-202ENST00000379996 CCDC94Q9BW85 323 aaPredicted RBP8.86□□□□□ -0.99
CDKL5-202ENST00000379996 MKNK2Q9HBH9 465 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 VEZTQ9HBM0 779 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 TNKSO95271 1327 aa8.86□□□□□ -0.99
CDKL5-202ENST00000379996 A0A087WWV3 80 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 USP27XA6NNY8 438 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 GUCY1A2P33402 732 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 CAP2P40123 477 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 GMCL1P1Q8NEA9 526 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 BICD2Q8TD16 824 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 TUBE1Q9UJT0 475 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 H3BQV1 296 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 RANBP6O60518 1105 aaKnown RBP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 TSPY3P0CV98 308 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 TSPY8P0CW00 308 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 SCNN1AP37088 669 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 TFAP4Q01664 338 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 NCBP1Q09161 790 aaKnown RBP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 TCP10Q12799 353 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 CERKLQ49MI3 558 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 BRAPQ7Z569 592 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 MRPS27Q92552 414 aaKnown RBP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 ZNF396Q96N95 335 aaPredicted RBP8.85□□□□□ -0.99
CDKL5-202ENST00000379996 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 GJB4Q9NTQ9 266 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 FAM53CQ9NYF3 392 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 FAM13BQ9NYF5 915 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 PRDM4Q9UKN5 801 aa8.85□□□□□ -0.99
CDKL5-202ENST00000379996 ERICH2A1L162 156 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 GOLGA6L6A8MZA4 724 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 U2AF2P26368 475 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 WTAPQ15007 396 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 DCBLD2Q96PD2 775 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 UBAC1Q9BSL1 405 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 MORC2Q9Y6X9 1032 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 STK36Q9NRP7 1315 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TSPY2A6NKD2 308 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TTLL1O95922 423 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 TOP1P11387 765 aaKnown RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 AKR1B1P15121 316 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 CDC27P30260 824 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 KCNJ6P48051 423 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 PROX2Q3B8N5 592 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 CRACR2BQ8N4Y2 399 aaPredicted RBP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDKL5-202ENST00000379996 KLRG1Q96E93 195 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 WDR18Q9BV38 432 aa8.84□□□□□ -0.99
CDKL5-202ENST00000379996 INCENPQ9NQS7 918 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms