RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SALL3Q9BXA9 1300 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 CST5P28325 142 aaPredicted RBP22.77■■□□□ 1.24
CBWD3-204ENST00000377349 SLC4A3P48751 1232 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 ACVR2BQ13705 512 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 KCNA10Q16322 511 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 SLFN13Q68D06 897 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 B4GALNT3Q6L9W6 998 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 TOX2Q96NM4 488 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 CDX2Q99626 313 aaPredicted RBP22.77■■□□□ 1.24
CBWD3-204ENST00000377349 STARD7Q9NQZ5 370 aa22.77■■□□□ 1.24
CBWD3-204ENST00000377349 CHD9Q3L8U1 2897 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 ZNF536O15090 1300 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 MOXD2PA6NHM9 499 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 BMP3P12645 472 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 PPARAQ07869 468 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 CHST13Q8NET6 341 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 NACAP1Q9BZK3 213 aa22.76■■□□□ 1.23
CBWD3-204ENST00000377349 UPF3AQ9H1J1 476 aaKnown RBP22.76■■□□□ 1.23
CBWD3-204ENST00000377349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.76■■□□□ 1.23
CBWD3-204ENST00000377349 GBF1Q92538 1859 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 TSPY3P0CV98 308 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 TSPY8P0CW00 308 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 TFAP4Q01664 338 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 CCDC144BQ3MJ40 725 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 ARMCX2Q7L311 632 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 ANKRD35Q8N283 1001 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 ABHD16BQ9H3Z7 469 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 FBXO40Q9UH90 709 aa22.75■■□□□ 1.23
CBWD3-204ENST00000377349 CTAGE5O15320 804 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 RAG1P15918 1043 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 CNTN2Q02246 1040 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 PDE4BQ07343 736 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
CBWD3-204ENST00000377349 CCDC129Q6ZRS4 1044 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.74■■□□□ 1.23
CBWD3-204ENST00000377349 FAM133AQ8N9E0 248 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 NUP133Q8WUM0 1156 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 GMCL1Q96IK5 515 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 LNPKQ9C0E8 428 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 NAPBQ9H115 298 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 TMEM39AQ9NV64 488 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 TBX21Q9UL17 535 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 MUC3AQ02505 3323 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 TMEM232C9JQI7 657 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 CDK7P50613 346 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 GJA9P57773 515 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 RASGRP2Q7LDG7 609 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 CCDC144CPQ8IYA2 1237 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 INCENPQ9NQS7 918 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 HOMER2Q9NSB8 354 aa22.74■■□□□ 1.23
CBWD3-204ENST00000377349 CHD7Q9P2D1 2997 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 ASTN1O14525 1302 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 STAT2P52630 851 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 NKX3-2P78367 333 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 FPGSQ05932 587 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 RNPC3Q96LT9 517 aaKnown RBP22.73■■□□□ 1.23
CBWD3-204ENST00000377349 AGBL1Q96MI9 1066 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 COL25A1Q9BXS0 654 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-204ENST00000377349 A1CFQ9NQ94 594 aaKnown RBP22.73■■□□□ 1.23
CBWD3-204ENST00000377349 IL17RBQ9NRM6 502 aa22.73■■□□□ 1.23
CBWD3-204ENST00000377349 CTDP1Q9Y5B0 961 aaPredicted RBP22.73■■□□□ 1.23
CBWD3-204ENST00000377349 ELP1O95163 1332 aa22.72■■□□□ 1.23
CBWD3-204ENST00000377349 ASGR1P07306 291 aa22.72■■□□□ 1.23
CBWD3-204ENST00000377349 C6orf222P0C671 652 aaPredicted RBP22.72■■□□□ 1.23
CBWD3-204ENST00000377349 FDX1P10109 184 aa22.72■■□□□ 1.23
CBWD3-204ENST00000377349 RWDD1Q9H446 243 aaPredicted RBP22.72■■□□□ 1.23
CBWD3-204ENST00000377349 ACAD9Q9H845 621 aa22.72■■□□□ 1.23
CBWD3-204ENST00000377349 ISY1Q9ULR0 285 aaKnown RBP22.72■■□□□ 1.23
CBWD3-204ENST00000377349 SOWAHBA6NEL2 793 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 DCDC2CA8MYV0 355 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 NMT2O60551 498 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 MCCP23508 829 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 NOVP48745 357 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 PDE1AP54750 535 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 CTDSPL2Q05D32 466 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 STAG1Q8WVM7 1258 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 CHMP4CQ96CF2 233 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 RNF146Q9NTX7 359 aa22.71■■□□□ 1.23
CBWD3-204ENST00000377349 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.7■■□□□ 1.22
CBWD3-204ENST00000377349 PLA2G6O60733 806 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 TIMP1P01033 207 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 SLC3A2P08195 630 aaKnown RBP22.7■■□□□ 1.22
CBWD3-204ENST00000377349 SLC1A4P43007 532 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 VPS53Q5VIR6 699 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 FAM160B2Q86V87 743 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 MYLIPQ8WY64 445 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 EVI5LQ96CN4 794 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 GLT1D1Q96MS3 346 aa22.7■■□□□ 1.22
CBWD3-204ENST00000377349 DDX49Q9Y6V7 483 aaKnown RBP22.7■■□□□ 1.22
CBWD3-204ENST00000377349 C16orf59Q7L2K0 433 aa22.69■■□□□ 1.22
CBWD3-204ENST00000377349 PCSK9Q8NBP7 692 aaKnown RBP22.69■■□□□ 1.22
CBWD3-204ENST00000377349 CHURC1Q8WUH1 139 aa22.69■■□□□ 1.22
CBWD3-204ENST00000377349 RILPL2Q969X0 211 aa22.69■■□□□ 1.22
CBWD3-204ENST00000377349 PTGS1P23219 599 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 SNAP25P60880 206 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 GNASQ5JWF2 1037 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 KCTD1Q719H9 257 aa22.68■■□□□ 1.22
CBWD3-204ENST00000377349 FAM126BQ8IXS8 530 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms