RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 UBASH3AP57075 661 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 TBX2Q13207 712 aaPredicted RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 RASGRF1Q13972 1273 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 MICU3Q86XE3 530 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 CREBRFQ8IUR6 639 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 CRACR2BQ8N4Y2 399 aaPredicted RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 SPATA20Q8TB22 786 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
UBD-203ENST00000377050 SLC26A6Q9BXS9 759 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 ZFYVE28Q9HCC9 887 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 A0A1B0GUL6 1792 aa12.64□□□□□ -0.39
UBD-203ENST00000377050 SEMA3EO15041 775 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 GNRH1P01148 92 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 TPM1P09493 284 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 CALM1P0DP23 149 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 CALM2P0DP24 149 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 CALM3P0DP25 149 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 ZNF18P17022 549 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
UBD-203ENST00000377050 XBP1P17861 261 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 PRMT2P55345 433 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
UBD-203ENST00000377050 MORC3Q14149 939 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 STK11IPQ8N1F8 1099 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 PHKBQ93100 1093 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 GJB4Q9NTQ9 266 aa12.63□□□□□ -0.39
UBD-203ENST00000377050 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
UBD-203ENST00000377050 AATFQ9NY61 560 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBD-203ENST00000377050 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 POSTNQ15063 836 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 SEC23AQ15436 765 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 TAF1CQ15572 869 aaPredicted RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 SUPT20HL1Q3ZLR7 823 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 LONRF3Q496Y0 759 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 DIS3L2Q8IYB7 885 aaKnown RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 PRDM4Q9UKN5 801 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 ZNF215Q9UL58 517 aaPredicted RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 DENND2AQ9ULE3 1009 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
UBD-203ENST00000377050 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 PPP2R3BQ9Y5P8 575 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 XDHP47989 1333 aa12.62□□□□□ -0.39
UBD-203ENST00000377050 TESPA1A2RU30 521 aaPredicted RBP12.61□□□□□ -0.39
UBD-203ENST00000377050 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 STX10O60499 249 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 KIF20AO95235 890 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 SERPINC1P01008 464 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 TOP1P11387 765 aaKnown RBP12.61□□□□□ -0.39
UBD-203ENST00000377050 TDO2P48775 406 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 CAP1Q01518 475 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 PPARAQ07869 468 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 SEMA3FQ13275 785 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 PNOCQ13519 176 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 FOXP4Q8IVH2 680 aaPredicted RBP12.61□□□□□ -0.39
UBD-203ENST00000377050 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
UBD-203ENST00000377050 ZNF654Q8IZM8 581 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
UBD-203ENST00000377050 ESR2Q92731 530 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 ERCC4Q92889 916 aaPredicted RBP12.61□□□□□ -0.39
UBD-203ENST00000377050 FERMT2Q96AC1 680 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 DEFB129Q9H1M3 183 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 ARMT1Q9H993 441 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 MAN1B1Q9UKM7 699 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 TACC3Q9Y6A5 838 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
UBD-203ENST00000377050 A0A087WWV3 80 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 BTBD18B2RXH4 712 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 BIN1O00499 593 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
UBD-203ENST00000377050 EVI5O60447 810 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 DDAH1O94760 285 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 H2AFXP16104 143 aaPredicted RBP12.6□□□□□ -0.39
UBD-203ENST00000377050 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 TRAPPC10P48553 1259 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 PLCD1P51178 756 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 CTDSPL2Q05D32 466 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 RAB11FIP4Q86YS3 637 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 ANKRD13AQ8IZ07 590 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
UBD-203ENST00000377050 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms