RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 SAMM50Q9Y512 469 aa13.65□□□□□ -0.22
GABBR1-203ENST00000377012 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 TERF2Q15554 542 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 ZYXQ15942 572 aaKnown RBP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 TICAM2Q86XR7 235 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 DNM2P50570 870 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 SND1Q7KZF4 910 aaKnown RBP eCLIP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 VPS36Q86VN1 386 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 SYCP3Q8IZU3 236 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 TC2NQ8N9U0 490 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
GABBR1-203ENST00000377012 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■■■■ 38.5
GABBR1-203ENST00000377012 TMOD2Q9NZR1 351 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
GABBR1-203ENST00000377012 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 POLD4Q9HCU8 107 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 FAM217BQ9NTX9 383 aaPredicted RBP13.63□□□□□ -0.23
GABBR1-203ENST00000377012 TFR2Q9UP52 801 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 SHTN1A0MZ66 631 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 NKX1-1Q15270 411 aaPredicted RBP13.63□□□□□ -0.23
GABBR1-203ENST00000377012 TCP11X2Q5H9J9 407 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 EARS2Q5JPH6 523 aaKnown RBP13.63□□□□□ -0.23
GABBR1-203ENST00000377012 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 RAD9BQ6WBX8 426 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 SLC4A9Q96Q91 983 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 CHP1Q99653 195 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
GABBR1-203ENST00000377012 SLC1A4P43007 532 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 RNF187Q5TA31 235 aaPredicted RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 HDAC6Q9UBN7 1215 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 OVOS2A0A0G2JMS6 1433 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 HSF2BPO75031 334 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 CAMTA2O94983 1202 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 LRRC27Q9C0I9 530 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 HPSEQ9Y251 543 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 PNPLA7Q6ZV29 1317 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ATP2C2O75185 946 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 NDUFA10O95299 355 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 CDR1P51861 262 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ZSCAN26Q16670 478 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 UBE2SQ16763 222 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 USP40Q9NVE5 1235 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ACTN4O43707 911 aaKnown RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 CD44P16070 742 aaKnown RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 BRD3Q15059 726 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 KCTD1Q719H9 257 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 KLHL7Q8IXQ5 586 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 PANX2Q96RD6 677 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 TMEM47Q9BQJ4 181 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 RWDD2AQ9UIY3 292 aa13.62□□□□□ -0.23
GABBR1-203ENST00000377012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
GABBR1-203ENST00000377012 TADA3O75528 432 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 TRAPPC10P48553 1259 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.23
GABBR1-203ENST00000377012 CLEC10AQ8IUN9 316 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 CCDC65Q8IXS2 484 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 HAUS4Q9H6D7 363 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 AKAP12Q02952 1782 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 TTC26A0AVF1 554 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 CYP4A11Q02928 519 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 KIAA0825Q8IV33 1275 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 ERMNQ8TAM6 284 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 P2RX5Q93086 422 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
GABBR1-203ENST00000377012 TMEM260Q9NX78 707 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 C8orf74Q6P047 294 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 ABHD10Q9NUJ1 306 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
GABBR1-203ENST00000377012 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 ANKRD65E5RJM6 399 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 ERLIN2O94905 339 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 WHAMMP3Q1A5X7 153 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 CC2D1AQ6P1N0 951 aaPredicted RBP13.6□□□□□ -0.23
GABBR1-203ENST00000377012 MARCH10Q8NA82 808 aaPredicted RBP13.6□□□□□ -0.23
GABBR1-203ENST00000377012 NUP58Q9BVL2 599 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 MORC2Q9Y6X9 1032 aaPredicted RBP13.6□□□□□ -0.23
GABBR1-203ENST00000377012 TCRBV5S4A2TA0A5A2 114 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 POTEMA6NI47 508 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 FOXP2O15409 715 aa13.6□□□□□ -0.23
GABBR1-203ENST00000377012 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
GABBR1-203ENST00000377012 EVX2Q03828 476 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms